Factsheet for GSMUA_Achr7P02510_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69320	Canola	nucleus	17.65	48.77
GSMUA_Achr7P21550_001	Banana	nucleus	11.41	48.48
CDY72198	Canola	nucleus	17.47	48.28
GSMUA_Achr10P...	Banana	nucleus	28.52	41.45
GSMUA_Achr1P17150_001	Banana	nucleus	36.01	34.47
GSMUA_Achr4P23690_001	Banana	nucleus	22.46	34.24
GSMUA_AchrUn_...	Banana	nucleus	34.4	33.74
KRH13249	Soybean	nucleus	29.59	31.14
VIT_13s0067g01630.t01	Wine grape	nucleus	30.84	30.95
KRH20589	Soybean	nucleus	29.23	30.77
GSMUA_Achr7P00280_001	Banana	nucleus	17.83	30.67
Bra002042.1-P	Field mustard	nucleus	25.31	30.21
CDY66041	Canola	nucleus	25.67	29.94
KRH62709	Soybean	nucleus	27.09	29.8
KRH56248	Soybean	nucleus	26.74	29.18
CDY08526	Canola	nucleus	25.49	28.49
AT5G06100.4	Thale cress	nucleus	26.38	28.46
TraesCS4A01G467100.1	Wheat	nucleus	14.26	28.27
CDY56849	Canola	nucleus	25.31	28.23
Bra034842.1-P	Field mustard	nucleus	25.67	27.85
AT3G11440.1	Thale cress	nucleus	26.74	27.12
GSMUA_Achr2P13930_001	Banana	nucleus	15.51	26.44
GSMUA_Achr4P27730_001	Banana	nucleus	16.04	25.35
GSMUA_Achr7P21560_001	Banana	nucleus	18.72	24.08
GSMUA_Achr1P01660_001	Banana	nucleus	11.41	19.88

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
EnsemblPlantsGene:GSMUA_Achr7G02510_001	EnsemblPlants:GSMUA_Achr7P02510_001	EnsemblPlants:GSMUA_Achr7T02510_001	InterPro:Homeobox-like_sf	InterPro:IPR017877	InterPro:IPR017930
UniProt:M0TE41	InterPro:Myb-like_dom	InterPro:Myb_dom	PFAM:PF13921	PFscan:PS50090	PFscan:PS51294
PANTHER:PTHR10641	PANTHER:PTHR10641:SF938	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI000296F317
SEG:seg	:	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G02510_001]

Coordinates

chr7:-:1980447..1984813

Molecular Weight (calculated)

62023.5 Da

IEP (calculated)

6.656

GRAVY (calculated)

-0.468

Length

561 amino acids

Sequence
(BLAST)

001: MEQINSQPSE EDSCGESTNK GNEDLKKGPW TSAEDEILVN YVDRFGEGNW NAVQKHTKLR RCGKSCRLRW INHLRPNLKK GAFTEDEEQL IIALHSKMGN
101: RWAQMAAFRP LKFQYIFFLF FFNLVDTVRY RYSFHLHLKL SPLPGRTDNE IKNYWNTRKK RCQRAGLPLY PPNACHNVSE ENVQCSRLSK YSYSYDQPLE
201: LLQGSFPDSP DIISDNFQTS YGASSYAMPF ADAAGFGSQN YSFANPTANC VEQSTDSEKF LLALHGSVAD VYPTTKQFLF QPSGSTPRNC FGSLHGADPS
301: SQSLAPLLGA IPGSYALLND TFSTYCPTRG TAKLELPSDQ CVETDASSRL SCPATPVSLY STAVADSYME SPSALVSLQS KCFPPWKSSP VLQEAHVLSS
401: AEKEPPLKSS SVTPIVKSSD VSECSINGTE LYSSPVAFDR YVKSPSATIP FQSSCVTPWK NVPLRSVLQE GHAPGNSEAK SSEKRSVTSI MKPNNVICSS
501: GLSINDREFN SKPVVADTYV GSPPATFSLQ SKYLTSWKSD PVLVEADAFD SAEEEPSKKF C

Best Arabidopsis Sequence Match ( AT5G06100.1 )
(BLAST)

001: MSYTSTDSDH NESPAADDNG SDCRSRWDGH ALKKGPWSSA EDDILIDYVN KHGEGNWNAV QKHTSLFRCG KSCRLRWANH LRPNLKKGAF SQEEEQLIVE
101: LHAKMGNRWA RMAAHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPEMHVE ALEWSQEYAK SRVMGEDRRH QDFLQLGSCE SNVFFDTLNF TDMVPGTFDL
201: ADMTAYKNMG NCASSPRYEN FMTPTIPSSK RLWESELLYP GCSSTIKQEF SSPEQFRNTS PQTISKTCSF SVPCDVEHPL YGNRHSPVMI PDSHTPTDGI
301: VPYSKPLYGA VKLELPSFQY SETTFDQWKK SSSPPHSDLL DPFDTYIQSP PPPTGGEESD LYSNFDTGLL DMLLLEAKIR NNSTKNNLYR SCASTIPSAD
401: LGQVTVSQTK SEEFDNSLKS FLVHSEMSTQ NADETPPSEL LFTLPSLEIV C

Arabidopsis Description

MYB33Transcription factor MYB33 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1W6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.