Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 36.24 | 40.93 |
| GSMUA_Achr1P17150_001 | Banana | nucleus | 43.35 | 32.25 |
| GSMUA_AchrUn_... | Banana | nucleus | 41.97 | 31.99 |
| VIT_13s0067g01630.t01 | Wine grape | nucleus | 39.68 | 30.95 |
| KRH13249 | Soybean | nucleus | 31.19 | 25.52 |
| KRH20589 | Soybean | nucleus | 30.05 | 24.58 |
| AT5G06100.4 | Thale cress | nucleus | 28.44 | 23.85 |
| KRH56248 | Soybean | nucleus | 27.75 | 23.54 |
| KRH62709 | Soybean | nucleus | 26.15 | 22.35 |
| CDY08526 | Canola | nucleus | 25.23 | 21.91 |
| CDY56849 | Canola | nucleus | 25.23 | 21.87 |
| Bra034842.1-P | Field mustard | nucleus | 25.23 | 21.28 |
| GSMUA_Achr2P13930_001 | Banana | nucleus | 15.6 | 20.67 |
| AT3G11440.1 | Thale cress | nucleus | 25.92 | 20.43 |
| CDY66041 | Canola | nucleus | 22.48 | 20.37 |
| Bra002042.1-P | Field mustard | nucleus | 21.79 | 20.21 |
| GSMUA_Achr4P27730_001 | Banana | nucleus | 16.28 | 20.0 |
| GSMUA_Achr7P00280_001 | Banana | nucleus | 14.22 | 19.02 |
| GSMUA_Achr7P02510_001 | Banana | nucleus | 24.08 | 18.72 |
| CDY69320 | Canola | nucleus | 8.49 | 18.23 |
| GSMUA_Achr4P23690_001 | Banana | nucleus | 15.37 | 18.21 |
| CDY72198 | Canola | nucleus | 8.26 | 17.73 |
| TraesCS4A01G467100.1 | Wheat | nucleus | 8.49 | 13.07 |
| GSMUA_Achr1P01660_001 | Banana | nucleus | 5.73 | 7.76 |
| GSMUA_Achr7P21550_001 | Banana | nucleus | 0.69 | 2.27 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P21560_001 | EnsemblPlants:GSMUA_Achr7T21560_001 | EnsemblPlantsGene:GSMUA_Achr7G21560_001 | Gene3D:1.10.10.60 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF938 |
| SEG:seg | UniParc:UPI00029671D5 | UniProt:M0TJJ2 | MapMan:35.1 | : | : |
Description
Putative Transcription factor GAMYB [Source:GMGC_GENE;Acc:GSMUA_Achr7G21560_001]
Coordinates
chr7:+:24305018..24306435
Molecular Weight (calculated)
47831.6 Da
IEP (calculated)
5.024
GRAVY (calculated)
-0.479
Length
436 amino acids
Sequence
(BLAST)
(BLAST)
001: MFQHFLQLPG RTDNEIKNYW NTRIKRHQRA GLPLYPNNIC FQASDENQQT QIVSCVAQQH SGILQGNSFD IPGTGFENLN NGHADLSYAS SFPDLSVSSM
101: ICHEYESPDY GYMDNVNHVK QVGAGCDATF YSGPPSASQF LMEPPGQLTF RLHYPYDPDP NFKDLATFGG EIPGRHAFPI DKFSASRPLS GAVKLELPSL
201: QCTETDDSSW TLCHSTPTLD AVNTYVESSP TTVSLQPEAI SPRSSGLLDA LLHEAQVLSG SKRYSSLKCS SSVIKHNEMV ECSGLNISET EWEDYNGPTY
301: PLGHSAPSVL KECTPPVCGS LSHGFPPFKD IPGSQNTFAV AEHLSTPNME EKNMSSHPDF YRPDALLGSD WLEEGSQVAK DHSVLSDAVT TLLGHDFCKE
401: HKIVPAGTSS DLFRGTKLES HSRGKIPDVS QMPELP
101: ICHEYESPDY GYMDNVNHVK QVGAGCDATF YSGPPSASQF LMEPPGQLTF RLHYPYDPDP NFKDLATFGG EIPGRHAFPI DKFSASRPLS GAVKLELPSL
201: QCTETDDSSW TLCHSTPTLD AVNTYVESSP TTVSLQPEAI SPRSSGLLDA LLHEAQVLSG SKRYSSLKCS SSVIKHNEMV ECSGLNISET EWEDYNGPTY
301: PLGHSAPSVL KECTPPVCGS LSHGFPPFKD IPGSQNTFAV AEHLSTPNME EKNMSSHPDF YRPDALLGSD WLEEGSQVAK DHSVLSDAVT TLLGHDFCKE
401: HKIVPAGTSS DLFRGTKLES HSRGKIPDVS QMPELP
001: MSYTSTDSDH NESPAADDNG SDCRSRWDGH ALKKGPWSSA EDDILIDYVN KHGEGNWNAV QKHTSLFRCG KSCRLRWANH LRPNLKKGAF SQEEEQLIVE
101: LHAKMGNRWA RMAAHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPEMHVE ALEWSQEYAK SRVMGEDRRH QDFLQLGSCE SNVFFDTLNF TDMVPGTFDL
201: ADMTAYKNMG NCASSPRYEN FMTPTIPSSK RLWESELLYP GCSSTIKQEF SSPEQFRNTS PQTISKTCSF SVPCDVEHPL YGNRHSPVMI PDSHTPTDGI
301: VPYSKPLYGA VKLELPSFQY SETTFDQWKK SSSPPHSDLL DPFDTYIQSP PPPTGGEESD LYSNFDTGLL DMLLLEAKIR NNSTKNNLYR SCASTIPSAD
401: LGQVTVSQTK SEEFDNSLKS FLVHSEMSTQ NADETPPRQR EKKRKPLLDI TRPDVLLASS WLDHGLGIVK ETGSMSDALA VLLGDDIGND YMNMSVGASS
501: GVGSCSWSNM PPVCQMTELP
101: LHAKMGNRWA RMAAHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPEMHVE ALEWSQEYAK SRVMGEDRRH QDFLQLGSCE SNVFFDTLNF TDMVPGTFDL
201: ADMTAYKNMG NCASSPRYEN FMTPTIPSSK RLWESELLYP GCSSTIKQEF SSPEQFRNTS PQTISKTCSF SVPCDVEHPL YGNRHSPVMI PDSHTPTDGI
301: VPYSKPLYGA VKLELPSFQY SETTFDQWKK SSSPPHSDLL DPFDTYIQSP PPPTGGEESD LYSNFDTGLL DMLLLEAKIR NNSTKNNLYR SCASTIPSAD
401: LGQVTVSQTK SEEFDNSLKS FLVHSEMSTQ NADETPPRQR EKKRKPLLDI TRPDVLLASS WLDHGLGIVK ETGSMSDALA VLLGDDIGND YMNMSVGASS
501: GVGSCSWSNM PPVCQMTELP
Arabidopsis Description
MYB33Transcription factor MYB33 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1W6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.