CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20589	Soybean	nucleus	90.99	90.99
KRH62709	Soybean	nucleus	61.54	64.31
KRH56248	Soybean	nucleus	61.73	64.01
GSMUA_Achr7P21550_001	Banana	nucleus	14.26	57.58
VIT_13s0067g01630.t01	Wine grape	nucleus	59.66	56.89
CDY69320	Canola	nucleus	21.58	56.65
CDY72198	Canola	nucleus	21.39	56.16
GSMUA_Achr10P...	Banana	nucleus	36.02	49.74
AT5G06100.4	Thale cress	nucleus	41.84	42.88
KRH18640	Soybean	nucleus	41.84	41.76
KRG89766	Soybean	nucleus	40.34	41.27
GSMUA_Achr1P17150_001	Banana	nucleus	44.84	40.78
CDY08526	Canola	nucleus	38.09	40.44
Bra002042.1-P	Field mustard	nucleus	35.65	40.43
CDY56849	Canola	nucleus	37.9	40.16
GSMUA_AchrUn_...	Banana	nucleus	42.96	40.03
CDY66041	Canola	nucleus	35.65	39.5
Bra034842.1-P	Field mustard	nucleus	38.09	39.27
AT3G11440.1	Thale cress	nucleus	40.71	39.24
Zm00001d033075_P001	Maize	nucleus	25.14	36.02
KRH46196	Soybean	nucleus	23.08	33.52
KRH26778	Soybean	nucleus	29.83	33.33
HORVU7Hr1G105450.1	Barley	nucleus	20.64	33.13
HORVU7Hr1G027370.1	Barley	nucleus	26.27	32.79
KRH14648	Soybean	extracellular, golgi	20.64	32.35
KRH46194	Soybean	nucleus	27.58	32.17
KRH22574	Soybean	nucleus	28.89	32.15
KXG38121	Sorghum	nucleus	27.39	31.95
TraesCS7D01G130100.1	Wheat	nucleus	25.52	31.92
TraesCS4A01G467100.1	Wheat	nucleus	16.89	31.8
TraesCS7B01G031000.1	Wheat	nucleus	25.14	31.75
KRH46191	Soybean	nucleus	27.2	31.45
GSMUA_Achr7P21560_001	Banana	nucleus	25.52	31.19
Zm00001d013801_P001	Maize	nucleus	26.83	31.15
HORVU6Hr1G026450.1	Barley	nucleus	22.89	30.5
KRG98748	Soybean	nucleus	30.21	30.43
HORVU7Hr1G105520.2	Barley	nucleus	22.14	30.26
KRH48761	Soybean	nucleus	17.45	30.0
Zm00001d014364_P002	Maize	nucleus	22.51	29.85
GSMUA_Achr7P02510_001	Banana	nucleus	31.14	29.59
TraesCS6D01G126900.1	Wheat	nucleus	22.14	29.57
TraesCS7D01G446700.1	Wheat	nucleus	22.14	29.5
TraesCS7B01G357900.1	Wheat	nucleus	22.14	29.5
EER90224	Sorghum	nucleus	23.64	29.44
KRH66578	Soybean	nucleus	16.89	28.94
Os06t0679400-01	Rice	nucleus	22.89	27.29
KRH27535	Soybean	nucleus	15.01	26.58
KRH36402	Soybean	nucleus	15.01	26.14
Os03t0578900-00	Rice	nucleus	24.2	24.43
Zm00001d036577_P001	Maize	nucleus	21.2	22.11

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100785877	MapMan:15.5.2.1	EMBL:ACUP02009676	EnsemblPlantsGene:GLYMA_15G225300	GO:GO:0000981
GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006357
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565
GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:K7MD72	ProteinID:KRH13247.1	ProteinID:KRH13248.1
EnsemblPlants:KRH13249	ProteinID:KRH13249	ProteinID:KRH13249.1	ProteinID:KRH13250.1	InterPro:Myb_dom	PFAM:PF00249
PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF938	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689
UniParc:UPI000294F806	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:+:41404763..41409852

Molecular Weight (calculated)

58739.4 Da

IEP (calculated)

4.754

GRAVY (calculated)

-0.601

Length

533 amino acids

Sequence
(BLAST)

001: MRQMKIDIED EVLPNDMSGT QLNDESYEGG AGIVLKKGPW TSTEDDILVD YVKKHGEGNW NAVQKHTGLL RCGKSCRLRW ANHLRPNLKK GAFTAEEERV
101: IAELHAKMGN KWARMAAHLP GRTDNEIKNY WNTRIKRCQR AGLPLYPPEV SLQALQESQH SQSSGGLNGG EKMHPDFLQK NSFEIHDGIF DSLKDNQGIL
201: PYVHELSDIS VYGNMLKGLD SSQYCSFVPP TLPKCKRLKE STIPFIDSCD MKKYDLYSFD QIRDNNSNKI AQSFGMQAPL DPGPSSHSSM CYSHSLSNGN
301: SSTSKPYEAV KLELPSLQYP ELDLGSWGSS PPPSLLESVD DFLQSPTPIS TLESDCSSPQ NSGLLDALLY QAKTMSSSKN HCSDKSSNSS TATPGDRADS
401: SALNVYETEW EDYADPVSPF GATSILNECT GLRANMNSLN EQLPVQTITG DLPNLESVDQ VWTPDSENQT LSLLNNTCPD FLLTSDWYDL GSGHGKNQAI
501: STDAATAFLG DDLATDHKYM TAGTSITMFG NPF

Best Arabidopsis Sequence Match ( AT5G06100.4 )
(BLAST)

001: MSYTSTDSDH NESPAADDNG SDCRSRWDGH ALKKGPWSSA EDDILIDYVN KHGEGNWNAV QKHTSLFRCG KSCRLRWANH LRPNLKKGAF SQEEEQLIVE
101: LHAKMGNRWA RMAAHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPEMHVE ALEWSQEYAK SRVMGEDRRH QDFLQLGSCE SNVFFDTLNF TDMVPGTFDL
201: ADMTAYKNMG NCASSPRYEN FMTPTIPSSK RLWESELLYP GCSSTIKQEF SSPEQFRNTS PQTISKTCSF SVPCDVEHPL YGNRHSPVMI PDSHTPTDGI
301: VPYSKPLYGA VKLELPSFQY SETTFDQWKK SSSPPHSDLL DPFDTYIQSP PPPTGGEESD LYSNFDTGLL DMLLLEAKIR NNSTKNNLYR SCASTIPSAD
401: LGQVTVSQTK SEEFDNSLKS FLVHSEMSTQ NADETPPRQR EKKRKPLLDI TRPDVLLASS WLDHGLGIVK ETGSMSDALA VLLGDDIGND YMNMSVGASS
501: GVGSCSWSNM PPVCQMTELP

Arabidopsis Description

MYB33Transcription factor MYB33 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1W6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.