Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72198 | Canola | nucleus | 98.52 | 98.52 |
| GSMUA_Achr7P21550_001 | Banana | nucleus | 33.99 | 52.27 |
| Bra002042.1-P | Field mustard | nucleus | 99.01 | 42.77 |
| CDY66041 | Canola | nucleus | 98.52 | 41.58 |
| CDY08526 | Canola | nucleus | 79.8 | 32.27 |
| CDY56849 | Canola | nucleus | 79.8 | 32.21 |
| AT3G11440.1 | Thale cress | nucleus | 82.76 | 30.38 |
| GSMUA_Achr10P... | Banana | nucleus | 51.72 | 27.2 |
| HORVU7Hr1G105450.1 | Barley | nucleus | 42.86 | 26.2 |
| Zm00001d033075_P001 | Maize | nucleus | 47.29 | 25.81 |
| HORVU6Hr1G026450.1 | Barley | nucleus | 44.83 | 22.75 |
| TraesCS6D01G126900.1 | Wheat | nucleus | 44.34 | 22.56 |
| HORVU7Hr1G105520.2 | Barley | nucleus | 42.86 | 22.31 |
| Zm00001d014364_P002 | Maize | nucleus | 43.84 | 22.14 |
| KRH20589 | Soybean | nucleus | 58.13 | 22.14 |
| CDX71809 | Canola | nucleus | 29.56 | 22.06 |
| TraesCS4A01G467100.1 | Wheat | nucleus | 30.54 | 21.91 |
| VIT_13s0067g01630.t01 | Wine grape | nucleus | 60.1 | 21.82 |
| HORVU7Hr1G027370.1 | Barley | nucleus | 45.81 | 21.78 |
| TraesCS7B01G357900.1 | Wheat | nucleus | 42.86 | 21.75 |
| CDY41164 | Canola | nucleus | 29.06 | 21.69 |
| CDY66700 | Canola | nucleus | 47.29 | 21.62 |
| KRH13249 | Soybean | nucleus | 56.65 | 21.58 |
| TraesCS7D01G446700.1 | Wheat | nucleus | 42.36 | 21.5 |
| EER90224 | Sorghum | nucleus | 45.32 | 21.5 |
| CDY67258 | Canola | nucleus | 45.32 | 21.4 |
| TraesCS7D01G130100.1 | Wheat | nucleus | 44.83 | 21.36 |
| TraesCS7B01G031000.1 | Wheat | nucleus | 44.34 | 21.33 |
| CDY68663 | Canola | nucleus | 47.78 | 21.23 |
| CDY19890 | Canola | nucleus | 44.83 | 21.21 |
| CDY15321 | Canola | nucleus | 46.8 | 21.21 |
| KXG38121 | Sorghum | nucleus | 47.29 | 21.01 |
| CDY19141 | Canola | nucleus | 45.81 | 20.95 |
| CDY20794 | Canola | nucleus | 42.36 | 20.92 |
| KRH62709 | Soybean | nucleus | 52.22 | 20.78 |
| KRH56248 | Soybean | nucleus | 52.22 | 20.62 |
| CDY38535 | Canola | nucleus | 43.84 | 20.6 |
| CDX83247 | Canola | nucleus | 43.84 | 20.46 |
| CDY64759 | Canola | nucleus | 30.54 | 20.33 |
| Zm00001d013801_P001 | Maize | nucleus | 45.81 | 20.26 |
| CDX67827 | Canola | nucleus | 30.05 | 20.07 |
| CDY48264 | Canola | nucleus | 47.29 | 20.04 |
| CDY12203 | Canola | nucleus | 47.29 | 19.96 |
| GSMUA_AchrUn_... | Banana | nucleus | 56.16 | 19.93 |
| GSMUA_Achr1P17150_001 | Banana | nucleus | 57.14 | 19.8 |
| Os06t0679400-01 | Rice | nucleus | 41.87 | 19.02 |
| GSMUA_Achr7P02510_001 | Banana | nucleus | 48.77 | 17.65 |
| Os03t0578900-00 | Rice | nucleus | 45.32 | 17.42 |
| CDY43016 | Canola | nucleus | 47.29 | 17.33 |
| CDY61426 | Canola | nucleus | 46.31 | 16.88 |
| Zm00001d036577_P001 | Maize | nucleus | 42.36 | 16.83 |
| CDX71481 | Canola | nucleus | 44.34 | 15.79 |
| GSMUA_Achr7P21560_001 | Banana | nucleus | 18.23 | 8.49 |
Protein Annotations
| EnsemblPlants:CDY69320 | EnsemblPlantsGene:GSBRNA2T00086599001 | Gene3D:1.10.10.60 | GO:A0A078JSE8 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF938 | PFAM:PF13921 | PFscan:PS51294 | ProteinID:CDY69320 | ProteinID:CDY69320.1 |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EE8DA2 | UniProt:A0A078JSE8 | MapMan:15.5.2.1 | : |
Description
BnaAnng29990DBnaAnng29990D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JSE8]
Coordinates
chrLK039135:+:3515..4239
Molecular Weight (calculated)
23122.0 Da
IEP (calculated)
9.091
GRAVY (calculated)
-0.924
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MSYTMVTDES DDAMYSSIYN ESPSAADNTG SGCTSRGKGS VLKKGPWTST EDGILIDYVK RHGEGNWNTV QKHTSLARCG KSCRLRWANH LRPNLKKGAF
101: SKEEEQLIVE MHARMGNKWA QMAEHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPGTHVE DLHWSQEYHP STSNVTDRRR HQDILQLGNS KASVLFDDLT
201: FAN
101: SKEEEQLIVE MHARMGNKWA QMAEHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPGTHVE DLHWSQEYHP STSNVTDRRR HQDILQLGNS KASVLFDDLT
201: FAN
001: MSYTTATADS DDGMHSSIHN ESPAPDSISN GCRSRGKRSV LKKGPWTSTE DGILIDYVKK HGEGNWNAVQ KHTSLARCGK SCRLRWANHL RPNLKKGAFS
101: QEEEQLIVEM HAKMGNKWAQ MAEHLPGRTD NEIKNYWNTR IKRRQRAGLP LYPPEIYVDD LHWSEEYTKS NIIRVDRRRR HQDFLQLGNS KDNVLFDDLN
201: FAASLLPAAS DLSDLVACNM LGTGASSSRY ESYMPPILPS PKQIWESGSR FPMCSSNIKH EFQSPEHFQN TAVQKNPRSC SISPCDVDHH PYENQHSSHM
301: MMVPDSHTVT YGMHPTSKPL FGAVKLELPS FQYSETSAFD QWKTTPSPPH SDLLDSVDAY IQSPPPSQVE ESDCFSSCDT GLLDMLLHEA KIKTSAKHSL
401: LMSSPQKSFS STTCTTNVTQ NVPRGSENLI KSGEYEDSQK YLGRSEITSP SQLSAGGFSS GELIKVTC
101: QEEEQLIVEM HAKMGNKWAQ MAEHLPGRTD NEIKNYWNTR IKRRQRAGLP LYPPEIYVDD LHWSEEYTKS NIIRVDRRRR HQDFLQLGNS KDNVLFDDLN
201: FAASLLPAAS DLSDLVACNM LGTGASSSRY ESYMPPILPS PKQIWESGSR FPMCSSNIKH EFQSPEHFQN TAVQKNPRSC SISPCDVDHH PYENQHSSHM
301: MMVPDSHTVT YGMHPTSKPL FGAVKLELPS FQYSETSAFD QWKTTPSPPH SDLLDSVDAY IQSPPPSQVE ESDCFSSCDT GLLDMLLHEA KIKTSAKHSL
401: LMSSPQKSFS STTCTTNVTQ NVPRGSENLI KSGEYEDSQK YLGRSEITSP SQLSAGGFSS GELIKVTC
Arabidopsis Description
ATMYB65Transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A178VKX5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.