Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007536.1-P | Field mustard | nucleus | 98.9 | 100.0 |
| CDX71809 | Canola | nucleus | 96.32 | 96.32 |
| AT3G60460.1 | Thale cress | nucleus | 83.46 | 75.67 |
| CDX67827 | Canola | nucleus | 80.88 | 72.37 |
| CDY64759 | Canola | nucleus | 80.51 | 71.8 |
| HORVU7Hr1G051740.1 | Barley | nucleus | 34.19 | 56.36 |
| KRH48761 | Soybean | nucleus | 54.41 | 47.74 |
| Os06t0118150-00 | Rice | nucleus | 17.28 | 47.0 |
| KRH66578 | Soybean | nucleus | 53.68 | 46.95 |
| VIT_15s0021g02040.t01 | Wine grape | nucleus | 52.57 | 46.28 |
| PGSC0003DMT400066066 | Potato | nucleus | 47.06 | 41.83 |
| Solyc10g019260.1.1 | Tomato | nucleus | 46.32 | 41.45 |
| Solyc01g090530.1.1 | Tomato | nucleus | 47.79 | 40.75 |
| Zm00001d031515_P001 | Maize | nucleus | 38.6 | 35.71 |
| TraesCS2A01G415400.1 | Wheat | nucleus | 43.01 | 35.24 |
| TraesCS2B01G434400.1 | Wheat | nucleus | 42.65 | 35.05 |
| TraesCS2D01G412500.1 | Wheat | nucleus | 42.65 | 34.94 |
| EES15365 | Sorghum | nucleus | 39.34 | 34.63 |
| Zm00001d002750_P001 | Maize | nucleus | 40.07 | 31.69 |
| Zm00001d026186_P001 | Maize | nucleus | 38.97 | 30.64 |
| GSMUA_Achr1P01660_001 | Banana | nucleus | 36.03 | 30.43 |
| TraesCS7A01G251700.1 | Wheat | nucleus | 38.97 | 29.69 |
| EES11224 | Sorghum | nucleus | 40.81 | 29.37 |
| TraesCS7B01G139400.1 | Wheat | nucleus | 38.24 | 29.3 |
| CDY72198 | Canola | nucleus | 21.69 | 29.06 |
| CDY69320 | Canola | nucleus | 21.69 | 29.06 |
| CDY20794 | Canola | nucleus | 26.47 | 17.52 |
| CDY19890 | Canola | nucleus | 26.1 | 16.55 |
| CDY67258 | Canola | nucleus | 26.1 | 16.51 |
| CDY38535 | Canola | nucleus | 25.74 | 16.2 |
| CDX83247 | Canola | nucleus | 25.37 | 15.86 |
| CDY19141 | Canola | nucleus | 25.37 | 15.54 |
| CDY15321 | Canola | nucleus | 25.37 | 15.4 |
| CDY12203 | Canola | nucleus | 26.1 | 14.76 |
| CDY66700 | Canola | nucleus | 23.9 | 14.64 |
| CDY48264 | Canola | nucleus | 25.74 | 14.61 |
| CDY66041 | Canola | nucleus | 25.37 | 14.35 |
| CDY08526 | Canola | nucleus | 26.47 | 14.34 |
| CDY56849 | Canola | nucleus | 26.47 | 14.31 |
| CDY68663 | Canola | nucleus | 23.53 | 14.0 |
| CDY43016 | Canola | nucleus | 27.94 | 13.72 |
| CDY61426 | Canola | nucleus | 27.94 | 13.64 |
| CDX71481 | Canola | nucleus | 25.37 | 12.11 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078HUY5 | UniProt:A0A078HUY5 | EnsemblPlants:CDY41164 | ProteinID:CDY41164 |
| ProteinID:CDY41164.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00072568001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFAM:PF13921 | PFscan:PS51294 |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF488 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EDF0FD |
| SEG:seg | : | : | : | : | : |
Description
BnaA09g38510DBnaA09g38510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HUY5]
Coordinates
chrLK032492:+:145321..146231
Molecular Weight (calculated)
31010.3 Da
IEP (calculated)
7.557
GRAVY (calculated)
-0.845
Length
272 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKMEATKKE DIKKGPWKAE EDEVLINHVK RYGPRDWSSI RSKGLLQRTG KSCRLRWVNK LRPNLKNGCK FSADEEKTVI DLQSQFGNKW ARIATYLPGR
101: TDNDVKNFWS SRLKRLARIL HNSSDASSSS CFDPKPNKGK NVKPIQSQSF GLVEEETRAS SATTSKILPY SSPLSDQVDD EALIRSPELG IKLENHQPFT
201: FGTDLDDPFF YDILGPADSS EPLFGLPQPF FEPSPAPRRF RHVSKDDEES DVFLHDFPAD MFDQVDDQTR SP
101: TDNDVKNFWS SRLKRLARIL HNSSDASSSS CFDPKPNKGK NVKPIQSQSF GLVEEETRAS SATTSKILPY SSPLSDQVDD EALIRSPELG IKLENHQPFT
201: FGTDLDDPFF YDILGPADSS EPLFGLPQPF FEPSPAPRRF RHVSKDDEES DVFLHDFPAD MFDQVDDQTR SP
001: MRKMEAKKEE IKKGPWKAEE DEVLINHVKR YGPRDWSSIR SKGLLQRTGK SCRLRWVNKL RPNLKNGCKF SADEERTVIE LQSEFGNKWA RIATYLPGRT
101: DNDVKNFWSS RQKRLARILH NSSDASSSSF NPKSSSSHRL KGKNVKPIRQ SSQGFGLVEE EVTVSSSCSQ MVPYSSDQVG DEVLRLPDLG VKLEHQPFAF
201: GTDLVLAEYS DSQNDANQQA ISPFSPESRE LLARLDDPFY YDILGPADSS EPLFALPQPF FEPSPVPRRC RHVSKDEEAD VFLDDFPADM FDQVDPIPSP
101: DNDVKNFWSS RQKRLARILH NSSDASSSSF NPKSSSSHRL KGKNVKPIRQ SSQGFGLVEE EVTVSSSCSQ MVPYSSDQVG DEVLRLPDLG VKLEHQPFAF
201: GTDLVLAEYS DSQNDANQQA ISPFSPESRE LLARLDDPFY YDILGPADSS EPLFALPQPF FEPSPVPRRC RHVSKDEEAD VFLDDFPADM FDQVDPIPSP
Arabidopsis Description
DUO1DUO1 [Source:UniProtKB/TrEMBL;Acc:F4JBU2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.