Factsheet for TraesCS7B01G139400.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G251700.1	Wheat	nucleus	95.21	94.68
HORVU7Hr1G051740.1	Barley	nucleus	43.94	94.55
Zm00001d031515_P001	Maize	nucleus	36.34	43.88
TraesCS2B01G434400.1	Wheat	nucleus	40.28	43.2
EES15365	Sorghum	nucleus	36.9	42.39
GSMUA_Achr1P01660_001	Banana	nucleus	35.77	39.44
KRH36402	Soybean	nucleus	33.8	39.22
Bra007536.1-P	Field mustard	nucleus	29.3	38.66
CDX71809	Canola	nucleus	29.58	38.6
KRH27535	Soybean	nucleus	32.68	38.54
CDY41164	Canola	nucleus	29.3	38.24
VIT_15s0021g02040.t01	Wine grape	nucleus	32.68	37.54
KRH66578	Soybean	nucleus	32.39	36.98
Solyc10g019260.1.1	Tomato	nucleus	31.27	36.51
KRH48761	Soybean	nucleus	31.83	36.45
Bra003413.1-P	Field mustard	nucleus	29.86	36.43
AT3G60460.1	Thale cress	nucleus	30.7	36.33
PGSC0003DMT400066066	Potato	nucleus	30.7	35.62
CDX67827	Canola	nucleus	30.42	35.53
CDY64759	Canola	nucleus	29.86	34.75
Solyc01g090530.1.1	Tomato	nucleus	29.58	32.92
TraesCS7B01G357900.1	Wheat	nucleus	22.82	20.25
TraesCS7B01G031000.1	Wheat	nucleus	19.72	16.59
TraesCS1B01G318800.3	Wheat	nucleus	20.56	15.9
TraesCS7B01G278400.1	Wheat	nucleus	20.0	14.58
TraesCS3B01G367500.2	Wheat	nucleus	21.97	13.54

Protein Annotations

EnsemblPlants:TraesCS7B01G139400.1	EnsemblPlantsGene:TraesCS7B01G139400	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb	PANTHER:PTHR10641
PANTHER:PTHR10641:SF488	PFAM:PF00249	PFAM:PF13921	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	TIGR:cd00167	MapMan:15.5.2.1	:	:	:

Description

No Description!

Coordinates

chr7B:-:175991209..175993011

Molecular Weight (calculated)

38684.6 Da

IEP (calculated)

7.705

GRAVY (calculated)

-0.531

Length

355 amino acids

Sequence
(BLAST)

001: MQPRGGGDRV AVRKGPWTAE EDEVLHQHVR EHGPREWSSI RSKGLLPRTG KSCRLRWVNK LRPDPRRTGC KFSSEEERVV IDLQAQFGNK WARIATYLPG
101: RTDNDVKNFW STRQKRLARI LRAPLPRRRS ASAAAKHSGG VGGVGAASSS AASNSHEAAA ARASEDQYRC FGMIPFRQTT MHQHHIGESS QEPPLAANQY
201: AGAPFSGAES VLPFPLGLAA MDVAAGCSSS YGGASEVHQP LPFLYAADPA PMVDSGGLVF HGNALIDGGV GVAYLEPKSG PEHYLEPKPE PVHYLEPKPE
301: QQTPPRFFGL EEEVDDYGLV APVRRGTADV LFGDLPPEMI DFFELPPPPS PSTRL

Best Arabidopsis Sequence Match ( AT3G60460.1 )
(BLAST)

001: MRKMEAKKEE IKKGPWKAEE DEVLINHVKR YGPRDWSSIR SKGLLQRTGK SCRLRWVNKL RPNLKNGCKF SADEERTVIE LQSEFGNKWA RIATYLPGRT
101: DNDVKNFWSS RQKRLARILH NSSDASSSSF NPKSSSSHRL KGKNVKPIRQ SSQGFGLVEE EVTVSSSCSQ MVPYSSDQVG DEVLRLPDLG VKLEHQPFAF
201: GTDLVLAEYS DSQNDANQQA ISPFSPESRE LLARLDDPFY YDILGPADSS EPLFALPQPF FEPSPVPRRC RHVSKDEEAD VFLDDFPADM FDQVDPIPSP

Arabidopsis Description

DUO1DUO1 [Source:UniProtKB/TrEMBL;Acc:F4JBU2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.