Factsheet for TraesCS7A01G251700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G051740.1	Barley	nucleus	44.82	96.97
TraesCS7B01G139400.1	Wheat	nucleus	94.68	95.21
Zm00001d031515_P001	Maize	nucleus	36.13	43.88
TraesCS2A01G415400.1	Wheat	nucleus	40.62	43.67
EES15365	Sorghum	nucleus	36.69	42.39
KRH36402	Soybean	nucleus	34.45	40.2
GSMUA_Achr1P01660_001	Banana	nucleus	36.13	40.06
KRH27535	Soybean	nucleus	33.33	39.53
Bra007536.1-P	Field mustard	nucleus	29.69	39.41
CDX71809	Canola	nucleus	29.97	39.34
CDY41164	Canola	nucleus	29.69	38.97
VIT_15s0021g02040.t01	Wine grape	nucleus	32.77	37.86
AT3G60460.1	Thale cress	nucleus	31.37	37.33
KRH66578	Soybean	nucleus	32.49	37.3
Solyc10g019260.1.1	Tomato	nucleus	31.65	37.17
KRH48761	Soybean	nucleus	31.93	36.77
Bra003413.1-P	Field mustard	nucleus	29.97	36.77
PGSC0003DMT400066066	Potato	nucleus	31.09	36.27
CDX67827	Canola	nucleus	30.53	35.86
CDY64759	Canola	nucleus	30.25	35.41
Solyc01g090530.1.1	Tomato	nucleus	29.69	33.23
TraesCS4A01G467100.1	Wheat	nucleus	15.97	20.14
TraesCS6A01G137800.1	Wheat	nucleus	21.29	18.91
TraesCS7A01G458700.1	Wheat	nucleus	21.29	18.81
TraesCS7A01G130700.1	Wheat	nucleus	20.45	17.26
TraesCS1A01G308100.2	Wheat	nucleus	21.01	16.34
TraesCS7A01G377100.1	Wheat	nucleus	19.89	14.55
TraesCS3A01G336500.1	Wheat	nucleus	21.85	13.31

Protein Annotations

EnsemblPlants:TraesCS7A01G251700.1	EnsemblPlantsGene:TraesCS7A01G251700	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb	PANTHER:PTHR10641
PANTHER:PTHR10641:SF488	PFAM:PF00249	PFAM:PF13921	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	TIGR:cd00167	MapMan:15.5.2.1	:	:	:

Description

No Description!

Coordinates

chr7A:+:235473505..235475283

Molecular Weight (calculated)

38835.6 Da

IEP (calculated)

6.706

GRAVY (calculated)

-0.531

Length

357 amino acids

Sequence
(BLAST)

001: MQPRGGGDRA AVRKGPWTAE EDEVLHQHVR EHGPREWSSI RSKGLLPRTG KSCRLRWVNK LRPDLKTGCK FSSEEERVVI DLQAQFGNKW ARIATYLPGR
101: TDNDVKNFWS TRQKRLARIL RAPLPRRRSA SAATAKHSGN GGGGVGAASS SAASNSHEAA AARASEDQYP CFGLIPFQQT TMHQHHVGES SQEPPLAANQ
201: YAGAPFPGAE SVLPFPLGFA AMDVAAAGCS SSYGAASEVH QPLPFLYAAD HAPMVDPGGL VFHGNALIDG GVGVAYLEPK SEPEHYLEPK PEPEHYLEPK
301: PEQQTPPRFF GLEEEVDDYG LVAPVRRGTA DVLFGDLPPE MIDFFELPPP PSPSIRL

Best Arabidopsis Sequence Match ( AT3G60460.1 )
(BLAST)

001: MRKMEAKKEE IKKGPWKAEE DEVLINHVKR YGPRDWSSIR SKGLLQRTGK SCRLRWVNKL RPNLKNGCKF SADEERTVIE LQSEFGNKWA RIATYLPGRT
101: DNDVKNFWSS RQKRLARILH NSSDASSSSF NPKSSSSHRL KGKNVKPIRQ SSQGFGLVEE EVTVSSSCSQ MVPYSSDQVG DEVLRLPDLG VKLEHQPFAF
201: GTDLVLAEYS DSQNDANQQA ISPFSPESRE LLARLDDPFY YDILGPADSS EPLFALPQPF FEPSPVPRRC RHVSKDEEAD VFLDDFPADM FDQVDPIPSP

Arabidopsis Description

DUO1DUO1 [Source:UniProtKB/TrEMBL;Acc:F4JBU2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.