Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P17150_001 | Banana | nucleus | 67.13 | 65.53 |
| GSMUA_Achr7P21550_001 | Banana | nucleus | 15.04 | 65.15 |
| CDY72198 | Canola | nucleus | 20.1 | 56.65 |
| CDY69320 | Canola | nucleus | 19.93 | 56.16 |
| GSMUA_Achr10P... | Banana | nucleus | 37.76 | 55.96 |
| VIT_13s0067g01630.t01 | Wine grape | nucleus | 47.2 | 48.3 |
| KRH13249 | Soybean | nucleus | 40.03 | 42.96 |
| KRH20589 | Soybean | nucleus | 39.34 | 42.21 |
| GSMUA_Achr7P21560_001 | Banana | nucleus | 31.99 | 41.97 |
| KRH62709 | Soybean | nucleus | 35.49 | 39.8 |
| KRH56248 | Soybean | nucleus | 35.66 | 39.69 |
| AT5G06100.4 | Thale cress | nucleus | 35.14 | 38.65 |
| GSMUA_Achr4P23690_001 | Banana | nucleus | 24.83 | 38.59 |
| Bra002042.1-P | Field mustard | nucleus | 30.94 | 37.66 |
| CDY66041 | Canola | nucleus | 30.94 | 36.8 |
| GSMUA_Achr7P00280_001 | Banana | nucleus | 20.8 | 36.5 |
| CDY08526 | Canola | nucleus | 31.64 | 36.06 |
| AT3G11440.1 | Thale cress | nucleus | 34.79 | 35.99 |
| CDY56849 | Canola | nucleus | 31.64 | 35.98 |
| Bra034842.1-P | Field mustard | nucleus | 31.64 | 35.01 |
| GSMUA_Achr7P02510_001 | Banana | nucleus | 33.74 | 34.4 |
| TraesCS4A01G467100.1 | Wheat | nucleus | 16.61 | 33.57 |
| GSMUA_Achr2P13930_001 | Banana | nucleus | 18.01 | 31.31 |
| GSMUA_Achr4P27730_001 | Banana | nucleus | 18.36 | 29.58 |
| GSMUA_Achr1P01660_001 | Banana | nucleus | 12.41 | 22.05 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP15100_001 | EnsemblPlants:GSMUA_AchrUn_randomT15100_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG15100_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF938 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI0002954E63 | UniProt:M0U9B9 | MapMan:15.5.2.1 | : | : |
Description
Putative Transcription factor GAMYB [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG15100_001]
Coordinates
chrchrUn_random:-:71214184..71223960
Molecular Weight (calculated)
62740.4 Da
IEP (calculated)
5.578
GRAVY (calculated)
-0.503
Length
572 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSLPNDSDK RMIPKDQIDS PSIEEGNSSG SLNGGNQVLK KGPWTSAEDA ILVDYVKKHG EGNWNAVQKH TGLSRCGKSC RLRWANHLRP NLKKGAFTPE
101: EEQLIIELHA KMGNKWARMA AYVNFRKVYS RKRNQQKLPG RTDNEIKNYW NTRIKRRQRA GLPLYPPNIC YQVSCENQQS NHSSDYSYNE KQPDEFLQGG
201: NLDIPDIVFD NYTNNGSLSY APSFPDIAVS SILSHRFGFQ NYALPNPPVC CVERPVETEH VVPASNGTVN GGCPRLDNVI FEPSGKMQES FGLSCLYDPD
301: SSSDSLAHHG GAIPGSCASL NDTFSASSLI PGTLKLELPS LQYTETDSNS WLACSSTPFD LVNTYVKSPP TASLQTDCVS PRKSGLLEAL LHEAHVLSSA
401: KKEPSEKISI SFITPAELAD GPKLSINDLK LVEHKDPVSP LGRSAAFVFN DGTPLISGNL LDEFPHPLAP SNLDSILVDA EHVSSPNLGE QDISHCRDSF
501: RPDALLGSAW LENSSQNAID HSVFNDAISI LLGQDMCNEY KPVPAETSSG VMQGFGLDSY PWNNMPSACQ MP
101: EEQLIIELHA KMGNKWARMA AYVNFRKVYS RKRNQQKLPG RTDNEIKNYW NTRIKRRQRA GLPLYPPNIC YQVSCENQQS NHSSDYSYNE KQPDEFLQGG
201: NLDIPDIVFD NYTNNGSLSY APSFPDIAVS SILSHRFGFQ NYALPNPPVC CVERPVETEH VVPASNGTVN GGCPRLDNVI FEPSGKMQES FGLSCLYDPD
301: SSSDSLAHHG GAIPGSCASL NDTFSASSLI PGTLKLELPS LQYTETDSNS WLACSSTPFD LVNTYVKSPP TASLQTDCVS PRKSGLLEAL LHEAHVLSSA
401: KKEPSEKISI SFITPAELAD GPKLSINDLK LVEHKDPVSP LGRSAAFVFN DGTPLISGNL LDEFPHPLAP SNLDSILVDA EHVSSPNLGE QDISHCRDSF
501: RPDALLGSAW LENSSQNAID HSVFNDAISI LLGQDMCNEY KPVPAETSSG VMQGFGLDSY PWNNMPSACQ MP
001: MSYTTATADS DDGMHSSIHN ESPAPDSISN GCRSRGKRSV LKKGPWTSTE DGILIDYVKK HGEGNWNAVQ KHTSLARCGK SCRLRWANHL RPNLKKGAFS
101: QEEEQLIVEM HAKMGNKWAQ MAEHLPGRTD NEIKNYWNTR IKRRQRAGLP LYPPEIYVDD LHWSEEYTKS NIIRVDRRRR HQDFLQLGNS KDNVLFDDLN
201: FAASLLPAAS DLSDLVACNM LGTGASSSRY ESYMPPILPS PKQIWESGSR FPMCSSNIKH EFQSPEHFQN TAVQKNPRSC SISPCDVDHH PYENQHSSHM
301: MMVPDSHTVT YGMHPTSKPL FGAVKLELPS FQYSETSAFD QWKTTPSPPH SDLLDSVDAY IQSPPPSQVE ESDCFSSCDT GLLDMLLHEA KIKTSAKHSL
401: LMSSPQKSFS STTCTTNVTQ NVPRGSENLI KSGEYEDSQK YLGRSEITSP SQLSAGGFSS AFAGNVVKTE ELDQVWEPKR VDITRPDVLL ASSWLDQGCY
501: GIVSDTSSMS DALALLGGDD IGNSYVTVGS SSGQAPRGVG SYGWTNMPPV WSL
101: QEEEQLIVEM HAKMGNKWAQ MAEHLPGRTD NEIKNYWNTR IKRRQRAGLP LYPPEIYVDD LHWSEEYTKS NIIRVDRRRR HQDFLQLGNS KDNVLFDDLN
201: FAASLLPAAS DLSDLVACNM LGTGASSSRY ESYMPPILPS PKQIWESGSR FPMCSSNIKH EFQSPEHFQN TAVQKNPRSC SISPCDVDHH PYENQHSSHM
301: MMVPDSHTVT YGMHPTSKPL FGAVKLELPS FQYSETSAFD QWKTTPSPPH SDLLDSVDAY IQSPPPSQVE ESDCFSSCDT GLLDMLLHEA KIKTSAKHSL
401: LMSSPQKSFS STTCTTNVTQ NVPRGSENLI KSGEYEDSQK YLGRSEITSP SQLSAGGFSS AFAGNVVKTE ELDQVWEPKR VDITRPDVLL ASSWLDQGCY
501: GIVSDTSSMS DALALLGGDD IGNSYVTVGS SSGQAPRGVG SYGWTNMPPV WSL
Arabidopsis Description
ATMYB65Transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A178VKX5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.