Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P27730_001 | Banana | nucleus | 54.1 | 50.14 |
| GSMUA_Achr4P23690_001 | Banana | nucleus | 37.99 | 33.97 |
| GSMUA_Achr7P00280_001 | Banana | nucleus | 30.7 | 30.98 |
| GSMUA_Achr7P21550_001 | Banana | nucleus | 10.94 | 27.27 |
| HORVU7Hr1G105450.1 | Barley | nucleus | 26.14 | 25.9 |
| GSMUA_Achr10P... | Banana | nucleus | 29.79 | 25.39 |
| Zm00001d033075_P001 | Maize | nucleus | 26.75 | 23.66 |
| TraesCS7A01G458700.1 | Wheat | nucleus | 27.96 | 22.77 |
| HORVU7Hr1G105520.2 | Barley | nucleus | 26.75 | 22.56 |
| TraesCS7B01G357900.1 | Wheat | nucleus | 27.36 | 22.5 |
| TraesCS7D01G446700.1 | Wheat | nucleus | 27.36 | 22.5 |
| EER90224 | Sorghum | nucleus | 28.88 | 22.2 |
| TraesCS6A01G137800.1 | Wheat | nucleus | 26.14 | 21.39 |
| Os06t0679400-01 | Rice | nucleus | 28.88 | 21.25 |
| TraesCS6D01G126900.1 | Wheat | nucleus | 25.53 | 21.05 |
| Zm00001d014364_P002 | Maize | nucleus | 25.53 | 20.9 |
| HORVU6Hr1G026450.1 | Barley | nucleus | 25.23 | 20.75 |
| TraesCS7D01G130100.1 | Wheat | nucleus | 26.14 | 20.19 |
| TraesCS7A01G130700.1 | Wheat | nucleus | 25.84 | 20.09 |
| HORVU7Hr1G027370.1 | Barley | nucleus | 25.84 | 19.91 |
| KXG38121 | Sorghum | nucleus | 27.36 | 19.69 |
| TraesCS7B01G031000.1 | Wheat | nucleus | 25.23 | 19.67 |
| GSMUA_Achr1P17150_001 | Banana | nucleus | 34.04 | 19.11 |
| Zm00001d013801_P001 | Maize | nucleus | 26.44 | 18.95 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.31 | 18.01 |
| Os03t0578900-00 | Rice | nucleus | 26.14 | 16.29 |
| Zm00001d036577_P001 | Maize | nucleus | 24.32 | 15.66 |
| GSMUA_Achr7P21560_001 | Banana | nucleus | 20.67 | 15.6 |
| GSMUA_Achr7P02510_001 | Banana | nucleus | 26.44 | 15.51 |
| GSMUA_Achr1P01660_001 | Banana | nucleus | 13.98 | 14.29 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P13930_001 | EnsemblPlants:GSMUA_Achr2T13930_001 | EnsemblPlantsGene:GSMUA_Achr2G13930_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF475 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI0002964F29 | UniProt:M0S7T4 | MapMan:35.1 | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G13930_001]
Coordinates
chr2:-:15867063..15868267
Molecular Weight (calculated)
35665.0 Da
IEP (calculated)
4.885
GRAVY (calculated)
-0.569
Length
329 amino acids
Sequence
(BLAST)
(BLAST)
001: MTGEEGGEPS TVEQAVAKGS AVGEGGKKGG GRGGEGLKKG PWTPAEDAIL VEHVRRHGEG NWNALGNKWA RMAAQLPGRT DNEIKNYWNT RLKRRQRAGL
101: PIYPPEMHDD ARLDGHHHHD PQRQVNTTSP VTLRQLAAEL PSLQLPPLVD PIAFRPLSGI TLSPFPQNPF ASQLGLGFPP SPASQPPTPT SLFQPPQQLG
201: LGNYAMNQPP PFSPAFAVKM ELPSCQLFAE PVGRSDEPSS CGLLEALLQD TQTIEDMKIA ELLELQEADE EGTRWEQLFC DRGNDGEGIK ETSQGCSSAK
301: FEGFDCCMGE AYKPNPSVSV SCLVIMSSY
101: PIYPPEMHDD ARLDGHHHHD PQRQVNTTSP VTLRQLAAEL PSLQLPPLVD PIAFRPLSGI TLSPFPQNPF ASQLGLGFPP SPASQPPTPT SLFQPPQQLG
201: LGNYAMNQPP PFSPAFAVKM ELPSCQLFAE PVGRSDEPSS CGLLEALLQD TQTIEDMKIA ELLELQEADE EGTRWEQLFC DRGNDGEGIK ETSQGCSSAK
301: FEGFDCCMGE AYKPNPSVSV SCLVIMSSY
001: MSYTSTDSDH NESPAADDNG SDCRSRWDGH ALKKGPWSSA EDDILIDYVN KHGEGNWNAV QKHTSLFRCG KSCRLRWANH LRPNLKKGAF SQEEEQLIVE
101: LHAKMGNRWA RMAAHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPEMHVE ALEWSQEYAK SRVMGEDRRH QDFLQLGSCE SNVFFDTLNF TDMVPGTFDL
201: ADMTAYKNMG NCASSPRYEN FMTPTIPSSK RLWESELLYP GCSSTIKQEF SSPEQFRNTS PQTISKTCSF SVPCDVEHPL YGNRHSPVMI PDSHTPTDGI
301: VPYSKPLYGA VKLELPSFQY SETTFDQWKK SSSPPHSDLL DPFDTYIQSP PPPTGGEESD LYSNFDTGLL DMLLLEAKIR NNSTKNNLYR SCASTIPSAD
401: LGQVTVSQTK SEEFDNSLKS FLVHSEMSTQ NADETPPSEL LFTLPSLEIV C
101: LHAKMGNRWA RMAAHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPEMHVE ALEWSQEYAK SRVMGEDRRH QDFLQLGSCE SNVFFDTLNF TDMVPGTFDL
201: ADMTAYKNMG NCASSPRYEN FMTPTIPSSK RLWESELLYP GCSSTIKQEF SSPEQFRNTS PQTISKTCSF SVPCDVEHPL YGNRHSPVMI PDSHTPTDGI
301: VPYSKPLYGA VKLELPSFQY SETTFDQWKK SSSPPHSDLL DPFDTYIQSP PPPTGGEESD LYSNFDTGLL DMLLLEAKIR NNSTKNNLYR SCASTIPSAD
401: LGQVTVSQTK SEEFDNSLKS FLVHSEMSTQ NADETPPSEL LFTLPSLEIV C
Arabidopsis Description
MYB33Transcription factor MYB33 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1W6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.