Factsheet for VIT_19s0090g00590.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0059g00700.t01	Wine grape	nucleus	33.41	36.38
Zm00001d033075_P001	Maize	nucleus	25.22	31.45
HORVU7Hr1G105450.1	Barley	nucleus	22.2	31.02
KRH46191	Soybean	nucleus	29.74	29.93
KRH46194	Soybean	nucleus	28.66	29.1
HORVU7Hr1G027370.1	Barley	nucleus	26.51	28.81
KRH46196	Soybean	nucleus	22.63	28.61
TraesCS7D01G130100.1	Wheat	nucleus	26.08	28.4
TraesCS7B01G031000.1	Wheat	nucleus	25.43	27.96
HORVU7Hr1G105520.2	Barley	nucleus	23.49	27.95
VIT_13s0067g01630.t01	Wine grape	nucleus	33.62	27.91
Zm00001d013801_P001	Maize	nucleus	27.59	27.89
TraesCS6D01G126900.1	Wheat	nucleus	23.71	27.57
TraesCS4A01G467100.1	Wheat	nucleus	16.81	27.56
HORVU6Hr1G026450.1	Barley	nucleus	23.71	27.5
KXG38121	Sorghum	nucleus	26.72	27.13
KRG98748	Soybean	nucleus	30.82	27.03
TraesCS7B01G357900.1	Wheat	nucleus	23.28	27.0
TraesCS7D01G446700.1	Wheat	nucleus	23.06	26.75
Zm00001d014364_P002	Maize	nucleus	22.63	26.12
VIT_06s0009g02480.t01	Wine grape	nucleus	28.88	25.57
EER90224	Sorghum	nucleus	23.28	25.23
Os06t0679400-01	Rice	nucleus	23.92	24.83
VIT_15s0021g02040.t01	Wine grape	nucleus	16.38	24.6
Os03t0578900-00	Rice	nucleus	25.0	21.97
Zm00001d036577_P001	Maize	nucleus	21.77	19.77

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100262343	wikigene:100262343	MapMan:15.5.2.1	ProteinID:CCB50668	ProteinID:CCB50668.1
UniProt:F6HEP4	EMBL:FN595751	GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0030154	GO:GO:0043565	GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930
EntrezGene:LOC100262343	wikigene:LOC100262343	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641
PANTHER:PTHR10641:SF475	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI00019856A8	ArrayExpress:VIT_19s0090g00590
EnsemblPlantsGene:VIT_19s0090g00590	EnsemblPlants:VIT_19s0090g00590.t01	RefSeq:XP_002278003	RefSeq:XP_002278003.1	SEG:seg	:

Description

No Description!

Coordinates

chr19:-:6691741..6695136

Molecular Weight (calculated)

50856.1 Da

IEP (calculated)

5.844

GRAVY (calculated)

-0.618

Length

464 amino acids

Sequence
(BLAST)

001: MVANSSGAGV EDRPENGGSD AGGVALKKGP WTAAEDAILV EYVTKHGEGN WNAVQKNSGL ARCGKSCRLR WANHLRPNLK KGSFSAEEER VILELHAKLG
101: NKWARMAAQL PGRTDNEIKN YWNTRIKRRL RQGLPVYPQE VQNQSNTVNQ PNFQNPPYPQ SPCPPSQTLF SSSPQFKPAF SSSLSLFDPI TTLSAHQTSP
201: ILTPPYQRYK RSGDTGPDFP LPFSQASLPS PLPSSSLPNQ FSHISPLQLN PVTFCQNSLP ILQTQFKFDQ MVPPVLDFSI NPELPSSQFS KKTHPYTADN
301: MKINSSSSNC GLLDELIGQA QAMVCNDSSR RQASFGSQEE KHMLNDFELF LSGSSTNPPF VSGPQWADST SLQPSTGEKP KQEPADDVNS MNEDLSDMLI
401: FHPAPNIPEW YSDNGVSIKQ SSSITEDDIG LDIPQLTSSS PVATTTDHGW TPGSSSWDNF SGIC

Best Arabidopsis Sequence Match ( AT2G32460.1 )
(BLAST)

001: MDGGGETTAT ATMEGRGLKK GPWTTTEDAI LTEYVRKHGE GNWNAVQKNS GLLRCGKSCR LRWANHLRPN LKKGSFTPDE EKIIIDLHAK LGNKWARMAS
101: QLPGRTDNEI KNYWNTRMKR RQRAGLPLYP HEIQHQGIDI DDEFEFDLTS FQFQNQDLDH NHQNMIQYTN SSNTSSSSSS FSSSSSQPSK RLRPDPLVST
201: NPGLNPIPDS SMDFQMFSLY NNSLENDNNQ FGFSVPLSSS SSSNEVCNPN HILEYISENS DTRNTNKKDI DAMSYSSLLM GDLEIRSSSF PLGLDNSVLE
301: LPSNQRPTHS FSSSPIIDNG VHLEPPSGNS GLLDALLEES QALSRGGLFK DVRVSSSDLC EVQDKRVKMD FENLLIDHLN SSNHSSLGAN PNIHNKYNEP
401: TMVKVTVDDD DELLTSLLNN FPSTTTPLPD WYRVTEMQNE ASYLAPPSGI LMGNHQGNGR VEPPTVPPSS SVDPMASLGS CYWSNMPSIC

Arabidopsis Description

MYB101Transcription factor MYB101 [Source:UniProtKB/Swiss-Prot;Acc:O80883]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.