Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG33583 | Sorghum | nucleus | 83.36 | 82.91 |
| TraesCS3B01G367500.2 | Wheat | nucleus | 86.26 | 82.81 |
| Zm00001d043131_P002 | Maize | nucleus | 82.46 | 81.57 |
| TraesCS3A01G336500.1 | Wheat | nucleus | 86.08 | 81.23 |
| TraesCS3D01G329400.1 | Wheat | nucleus | 86.26 | 80.98 |
| HORVU3Hr1G079490.4 | Barley | nucleus | 86.98 | 77.83 |
| Zm00001d012544_P001 | Maize | nucleus | 64.2 | 72.15 |
| Os06t0605750-00 | Rice | nucleus | 13.74 | 44.44 |
| Os06t0118150-00 | Rice | nucleus | 7.05 | 39.0 |
| Os05t0490600-00 | Rice | nucleus | 25.5 | 35.79 |
| Os06t0679400-01 | Rice | nucleus | 23.15 | 28.64 |
| Os03t0578900-00 | Rice | nucleus | 23.15 | 24.24 |
| Os06t0605600-01 | Rice | cytosol, mitochondrion, nucleus | 13.38 | 21.57 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:4327362 | EMBL:AK063951 | EMBL:AK102841 | ProteinID:BAB85242.1 |
| ProteinID:BAD68205.1 | ProteinID:BAF06506.1 | ProteinID:BAS74878.1 | ProteinID:BAS74879.1 | ProteinID:EAZ13907.1 | InterPro:GAMYB-like |
| GO:GO:0000003 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006357 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009555 | GO:GO:0009791 | GO:GO:0009908 |
| GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | GO:GO:0048653 | InterPro:Homeobox-like_sf |
| InterPro:IPR017930 | InterPro:Myb_dom | EnsemblPlantsGene:Os01g0812000 | EnsemblPlants:Os01t0812000-02 | PFAM:PF00249 | PIRSF:PIRSF001693 |
| PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF475 | UniProt:Q0JIC2 | InterPro:SANT/Myb | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI00000A43C9 | RefSeq:XP_015622335.1 | RefSeq:XP_015622336.1 | SEG:seg | : |
Description
GIBBERELLIN MYB GENETranscriptional activator of gibberellin-dependent alpha-amylase expression, Regulation of nutrient mobilization in germination (Os01t0812000-01);Myb-like transcription factor, Induction of alpha-amylase in aleurone, Pollen development (Os01t0812000-02);Similar to cDNA clone:J033109N02, full insert sequence. (Os01t0812000-03)
Coordinates
chr1:+:34508454..34512738
Molecular Weight (calculated)
59963.8 Da
IEP (calculated)
4.883
GRAVY (calculated)
-0.508
Length
553 amino acids
Sequence
(BLAST)
(BLAST)
001: MYRVKSESDC DMIHQEQMDS PVADDGSSGG SPHRGGGPPL KKGPWTSAED AILVDYVKKH GEGNWNAVQK NTGLFRCGKS CRLRWANHLR PNLKKGAFTA
101: EEERLIIQLH SKMGNKWARM AAHLPGRTDN EIKNYWNTRI KRCQRAGLPI YPTSVCNQSS NEDQQCSSDF DCGENLSNDL LNANGLYLPD FTCDNFIANS
201: EALPYAPHLS AVSISNLLGQ SFASKSCSFM DQVNQTGMLK QSDGVLPGLS DTINGVISSV DQFSNDSEKL KQAVGFDYLH EANSTSKIIA PFGGALNGSH
301: AFLNGNFSAS RPTSGPLKME LPSLQDTESD PNSWLKYTVA PALQPTELVD PYLQSPAATP SVKSECASPR NSGLLEELIH EAQTLRSGKN QQTSVISSSS
401: SVGTPCNTTV LSPEFDMCQE YWEEQHPGPF LNDCAPFSGN SFTESTPPVS AASPDIFQLS KVSPAQSTSM GSGEQVMGPK YEPGDTSPHP ENFRPDALFS
501: GNTADPSVFN NAIAMLLGND LSIDCRPVLG DGIMFNSSSW SNMPHACEMS EFK
101: EEERLIIQLH SKMGNKWARM AAHLPGRTDN EIKNYWNTRI KRCQRAGLPI YPTSVCNQSS NEDQQCSSDF DCGENLSNDL LNANGLYLPD FTCDNFIANS
201: EALPYAPHLS AVSISNLLGQ SFASKSCSFM DQVNQTGMLK QSDGVLPGLS DTINGVISSV DQFSNDSEKL KQAVGFDYLH EANSTSKIIA PFGGALNGSH
301: AFLNGNFSAS RPTSGPLKME LPSLQDTESD PNSWLKYTVA PALQPTELVD PYLQSPAATP SVKSECASPR NSGLLEELIH EAQTLRSGKN QQTSVISSSS
401: SVGTPCNTTV LSPEFDMCQE YWEEQHPGPF LNDCAPFSGN SFTESTPPVS AASPDIFQLS KVSPAQSTSM GSGEQVMGPK YEPGDTSPHP ENFRPDALFS
501: GNTADPSVFN NAIAMLLGND LSIDCRPVLG DGIMFNSSSW SNMPHACEMS EFK
001: MSYTSTDSDH NESPAADDNG SDCRSRWDGH ALKKGPWSSA EDDILIDYVN KHGEGNWNAV QKHTSLFRCG KSCRLRWANH LRPNLKKGAF SQEEEQLIVE
101: LHAKMGNRWA RMAAHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPEMHVE ALEWSQEYAK SRVMGEDRRH QDFLQLGSCE SNVFFDTLNF TDMVPGTFDL
201: ADMTAYKNMG NCASSPRYEN FMTPTIPSSK RLWESELLYP GCSSTIKQEF SSPEQFRNTS PQTISKTCSF SVPCDVEHPL YGNRHSPVMI PDSHTPTDGI
301: VPYSKPLYGA VKLELPSFQY SETTFDQWKK SSSPPHSDLL DPFDTYIQSP PPPTGGEESD LYSNFDTGLL DMLLLEAKIR NNSTKNNLYR SCASTIPSAD
401: LGQVTVSQTK SEEFDNSLKS FLVHSEMSTQ NADETPPRQR EKKRKPLLDI TRPDVLLASS WLDHGLGIVK ETGSMSDALA VLLGDDIGND YMNMSVGASS
501: GVGSCSWSNM PPVCQMTELP
101: LHAKMGNRWA RMAAHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPEMHVE ALEWSQEYAK SRVMGEDRRH QDFLQLGSCE SNVFFDTLNF TDMVPGTFDL
201: ADMTAYKNMG NCASSPRYEN FMTPTIPSSK RLWESELLYP GCSSTIKQEF SSPEQFRNTS PQTISKTCSF SVPCDVEHPL YGNRHSPVMI PDSHTPTDGI
301: VPYSKPLYGA VKLELPSFQY SETTFDQWKK SSSPPHSDLL DPFDTYIQSP PPPTGGEESD LYSNFDTGLL DMLLLEAKIR NNSTKNNLYR SCASTIPSAD
401: LGQVTVSQTK SEEFDNSLKS FLVHSEMSTQ NADETPPRQR EKKRKPLLDI TRPDVLLASS WLDHGLGIVK ETGSMSDALA VLLGDDIGND YMNMSVGASS
501: GVGSCSWSNM PPVCQMTELP
Arabidopsis Description
MYB33Transcription factor MYB33 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1W6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.