Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G091600.9 | Barley | plastid | 48.56 | 19.24 |
| HORVU7Hr1G067620.2 | Barley | plastid | 43.75 | 17.7 |
| HORVU3Hr1G023370.1 | Barley | mitochondrion | 0.48 | 0.96 |
| HORVU5Hr1G007240.2 | Barley | plastid | 0.48 | 0.62 |
| Zm00001d010157_P001 | Maize | plastid | 0.96 | 0.49 |
| HORVU1Hr1G001590.2 | Barley | plastid | 0.48 | 0.48 |
| HORVU7Hr1G093330.2 | Barley | plastid | 0.48 | 0.41 |
| HORVU4Hr1G025240.1 | Barley | plastid | 0.48 | 0.4 |
| HORVU0Hr1G033200.1 | Barley | plastid | 0.48 | 0.34 |
Protein Annotations
| EnsemblPlants:HORVU0Hr1G014150.5 | EnsemblPlantsGene:HORVU0Hr1G014150 | Gene3D:2.160.10.10 | Gene3D:3.90.550.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016740 | GO:GO:0016779 | InterPro:IPR029044 |
| InterPro:NTP_transferase_dom | InterPro:Nucleotide-diphossugar_trans | InterPro:Trimer_LpxA-like_sf | PANTHER:PTHR43523 | PANTHER:PTHR43523:SF8 | PFAM:PF00483 |
| SUPFAM:SSF51161 | SUPFAM:SSF53448 | UniParc:UPI000B487B82 | UniProt:A0A287E1D1 | MapMan:3.2.2.3 | : |
Description
No Description!
Coordinates
chrchrUn:-:78679585..78681870
Molecular Weight (calculated)
23242.6 Da
IEP (calculated)
7.165
GRAVY (calculated)
-0.345
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: VRWRFPTAND FGSEIIPAAA REINVKAYLF NDYWEDIGTI KSFFEANLAL AEQPSKFSFY DASKPMYTSR RNLPPSMISG SKITDSIISH GCFLDKCRVE
101: HSVVGIRSRI GSNVHLKDTV MLGADFYETD AERGDQLAEG KVPIGIGENT SIQNCIIDKN ARIGKNVTIA NTEGCTGIRQ DIRRLPHPVR HHGCAEELSD
201: RGWISHMI
101: HSVVGIRSRI GSNVHLKDTV MLGADFYETD AERGDQLAEG KVPIGIGENT SIQNCIIDKN ARIGKNVTIA NTEGCTGIRQ DIRRLPHPVR HHGCAEELSD
201: RGWISHMI
001: MESCFPAMKL NQCTFGLNNE IVSERVSAFW GTQVVKPNHL RTTKLRSAPQ KKIQTNLIRS VLTPFVDQES HEPLLRTQNA DPKNVASIIL GGGAGTRLFP
101: LTSKRAKPAV PIGGCYRLID IPMSNCINSG IRKIFILTQF NSFSLNRHLS RTYNFGNGVN FGDGFVEVLA ATQTSGDAGK KWFQGTADAV RQFIWVFEDA
201: KTKNVEHVLI LSGDHLYRMD YMNFVQKHIE SNADITVSCL PMDESRASDF GLLKIDQSGK IIQFSEKPKG DDLKAMQVDT SILGLPPKEA AESPYIASMG
301: VYVFRKEVLL KLLRSSYPTS NDFGSEIIPL AVGEHNVQAF LFNDYWEDIG TIGSFFDANL ALTEQPPKFQ FYDQKTPFFT SPRFLPPTKV DKCRILDSIV
401: SHGCFLRECS VQHSIVGIRS RLESGVELQD TMMMGADFYQ TEAEIASLLA EGKVPVGVGQ NTKIKNCIID KNAKIGKNVV IANADGVEEG DRPEEGFHIR
501: SGITVVLKNA TIRDGLHI
101: LTSKRAKPAV PIGGCYRLID IPMSNCINSG IRKIFILTQF NSFSLNRHLS RTYNFGNGVN FGDGFVEVLA ATQTSGDAGK KWFQGTADAV RQFIWVFEDA
201: KTKNVEHVLI LSGDHLYRMD YMNFVQKHIE SNADITVSCL PMDESRASDF GLLKIDQSGK IIQFSEKPKG DDLKAMQVDT SILGLPPKEA AESPYIASMG
301: VYVFRKEVLL KLLRSSYPTS NDFGSEIIPL AVGEHNVQAF LFNDYWEDIG TIGSFFDANL ALTEQPPKFQ FYDQKTPFFT SPRFLPPTKV DKCRILDSIV
401: SHGCFLRECS VQHSIVGIRS RLESGVELQD TMMMGADFYQ TEAEIASLLA EGKVPVGVGQ NTKIKNCIID KNAKIGKNVV IANADGVEEG DRPEEGFHIR
501: SGITVVLKNA TIRDGLHI
Arabidopsis Description
APL2Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55230]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.