Factsheet for HORVU4Hr1G025240.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G023370.1	Barley	mitochondrion	36.76	89.42
HORVU1Hr1G001590.2	Barley	plastid	71.15	86.12
HORVU7Hr1G093330.2	Barley	plastid	71.54	73.88
HORVU0Hr1G033200.1	Barley	plastid	83.4	71.53
HORVU5Hr1G007240.2	Barley	plastid	37.55	59.38
TraesCS5B01G484700.1	Wheat	plastid	64.43	32.47
TraesCS5D01G484500.2	Wheat	plastid	64.03	32.08
TraesCS5A01G472000.1	Wheat	plastid	63.64	31.88
Os03t0735000-01	Rice	plastid	58.89	29.16
EER90919	Sorghum	plastid	57.71	28.8
Zm00001d033910_P002	Maize	plastid	57.31	27.67
PGSC0003DMT400023304	Potato	cytosol, plastid	52.96	26.02
VIT_05s0020g02880.t01	Wine grape	plastid	53.36	25.96
CDY68209	Canola	plastid	52.57	25.78
CDX92546	Canola	plastid	52.57	25.78
Bra002221.1-P	Field mustard	plastid	52.57	25.78
Solyc01g079790.2.1	Tomato	nucleus, plastid	52.17	25.63
KRH02097	Soybean	nucleus, plastid	52.96	25.62
GSMUA_Achr1P11820_001	Banana	plastid	54.94	25.6
KRH51050	Soybean	nucleus, plastid	52.57	25.58
AT5G19220.1	Thale cress	plastid	52.57	25.48
CDY02573	Canola	plastid	50.59	24.81
Bra023713.1-P	Field mustard	plastid	50.59	24.81
CDY47206	Canola	plastid	50.99	23.84
HORVU1Hr1G091600.9	Barley	plastid	41.9	20.19
HORVU7Hr1G067620.2	Barley	plastid	37.94	18.68
HORVU0Hr1G014150.5	Barley	cytosol	0.4	0.48

Protein Annotations

EnsemblPlants:HORVU4Hr1G025240.1	EnsemblPlantsGene:HORVU4Hr1G025240	Gene3D:3.90.550.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016779	InterPro:IPR029044	InterPro:NTP_transferase_dom
InterPro:Nucleotide-diphossugar_trans	ncoils:Coil	PANTHER:PTHR43523	PANTHER:PTHR43523:SF8	PFAM:PF00483	SEG:seg
SUPFAM:SSF53448	UniParc:UPI000B48166B	UniProt:A0A287NKW4	MapMan:50.2.7	:	:

Description

No Description!

Coordinates

chrchr4H:-:147039186..147040686

Molecular Weight (calculated)

24033.7 Da

IEP (calculated)

8.467

GRAVY (calculated)

-0.109

Length

253 amino acids

Sequence
(BLAST)

001: PSPAPPPLPP SPTSPPSLLL GCACFRPLQG RRQCCPSVRV SVTTMESVAA IAVATSADED TETTIPRTVV AVILGGGAGT RLFPFTKRRA KPTVLIGDAY
101: RLIDVPMRNC INIGINKVYV LTQFNSASLN RHLSRAYNFS NGVGFGDGFD EVLAATQRPG SEGKRWFQGT TDAVRQFAWL FDDAKSKDIE DVLILSGDHL
201: YRMDYMDFVX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXYYHHYLA STK

Best Arabidopsis Sequence Match ( AT1G27680.1 )
(BLAST)

001: MESCFPAMKL NQCTFGLNNE IVSERVSAFW GTQVVKPNHL RTTKLRSAPQ KKIQTNLIRS VLTPFVDQES HEPLLRTQNA DPKNVASIIL GGGAGTRLFP
101: LTSKRAKPAV PIGGCYRLID IPMSNCINSG IRKIFILTQF NSFSLNRHLS RTYNFGNGVN FGDGFVEVLA ATQTSGDAGK KWFQGTADAV RQFIWVFEDA
201: KTKNVEHVLI LSGDHLYRMD YMNFVQKHIE SNADITVSCL PMDESRASDF GLLKIDQSGK IIQFSEKPKG DDLKAMQVDT SILGLPPKEA AESPYIASMG
301: VYVFRKEVLL KLLRSSYPTS NDFGSEIIPL AVGEHNVQAF LFNDYWEDIG TIGSFFDANL ALTEQPPKFQ FYDQKTPFFT SPRFLPPTKV DKCRILDSIV
401: SHGCFLRECS VQHSIVGIRS RLESGVELQD TMMMGADFYQ TEAEIASLLA EGKVPVGVGQ NTKIKNCIID KNAKIGKNVV IANADGVEEG DRPEEGFHIR
501: SGITVVLKNA TIRDGLHI

Arabidopsis Description

APL2Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55230]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.