Factsheet for TraesCS5A01G472000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G484500.2	Wheat	plastid	97.82	97.82
TraesCS5B01G484700.1	Wheat	plastid	97.23	97.81
Os03t0735000-01	Rice	plastid	85.74	84.74
EER90919	Sorghum	plastid	83.37	83.04
Zm00001d033910_P002	Maize	plastid	82.38	79.39
HORVU0Hr1G033200.1	Barley	plastid	45.54	77.97
HORVU1Hr1G001590.2	Barley	plastid	31.68	76.56
HORVU7Hr1G093330.2	Barley	plastid	36.44	75.1
Solyc01g079790.2.1	Tomato	nucleus, plastid	72.87	71.46
CDX92546	Canola	plastid	72.87	71.32
Bra002221.1-P	Field mustard	plastid	72.87	71.32
PGSC0003DMT400023304	Potato	cytosol, plastid	72.48	71.07
CDY68209	Canola	plastid	72.48	70.93
CDY02573	Canola	plastid	72.28	70.74
Bra023713.1-P	Field mustard	plastid	72.28	70.74
VIT_05s0020g02880.t01	Wine grape	plastid	72.28	70.19
AT5G19220.1	Thale cress	plastid	72.28	69.92
KRH51050	Soybean	nucleus, plastid	71.88	69.81
KRH02097	Soybean	nucleus, plastid	71.68	69.22
GSMUA_Achr1P11820_001	Banana	plastid	73.07	67.96
CDY47206	Canola	plastid	72.28	67.47
HORVU4Hr1G025240.1	Barley	plastid	31.88	63.64
TraesCS7A01G287400.2	Wheat	golgi, plastid	49.7	49.02
TraesCS1A01G419600.2	Wheat	plastid	51.09	47.69

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	InterPro:ADP-Glc_PPase
InterPro:ADP_Glu_pyroP_CS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0005978	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0008878	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
GO:GO:0016779	InterPro:IPR029044	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483	ScanProsite:PS00808
ScanProsite:PS00809	ScanProsite:PS00810	PANTHER:PTHR43523	PANTHER:PTHR43523:SF8	SUPFAM:SSF51161	SUPFAM:SSF53448
TIGRFAMs:TIGR02091	EnsemblPlantsGene:TraesCS5A01G472000	EnsemblPlants:TraesCS5A01G472000.1	InterPro:Trimer_LpxA-like_sf	TIGR:cd02508	TIGR:cd04651
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5A:+:649187425..649191666

Molecular Weight (calculated)

54807.6 Da

IEP (calculated)

8.371

GRAVY (calculated)

-0.114

Length

505 amino acids

Sequence
(BLAST)

001: MDLRVAAPAS VAAAARRGVL GVGCAGVRPP QGRRQCRPSV RVSVATTESS AAAAAVAASA AEDEETTNPR TVVAVILGGG AGTRLFPLTK RRAKPAVPIG
101: GAYRLIDVPM SNCINSGINK VYVLTQFNSA SLNRHLSRAY NFSNGVGFGD GFVEVLAATQ RAGSEGKMWF QGTADAVRQF AWLFDDAKSK DIEDVLILSG
201: DHLYRMDYMD FVQSHRQRNA GISICCLPID GSRASDFGLM KIDGTGRVIS FSEKPRGADL KAMQVDTTLL GLPKEEAEKK PYIASMGVYI FKKEILLNLL
301: RWRFPTANDF GSEIIPAAAR EINVKAYLFN DYWEDIGTIK SFFEANLALA EQPSKFSFYD ASKPMYTSRR NLPPSMISTS KITDSIISHG CFLDKCRVEH
401: SVVGIRSRIG SNVHLKDTVM LGADFYETDM ERGDQLAEGK VPIGIGENTS IQNCIIDKNA RIGKNVTIAN AEGVQEGDRA SEGFHIRSGI TVVLKNSVIE
501: DGLVI

Best Arabidopsis Sequence Match ( AT5G19220.1 )
(BLAST)

001: MVVSADCRIS LSAPSCIRSS STGLTRHIKL GSFCNGELMG KKLNLSQLPN IRLRSSTNFS QKRILMSLNS VAGESKVQEL ETEKRDPRTV ASIILGGGAG
101: TRLFPLTKRR AKPAVPIGGA YRLIDVPMSN CINSGINKVY ILTQYNSASL NRHLARAYNS NGLGFGDGYV EVLAATQTPG ESGKRWFQGT ADAVRQFHWL
201: FEDARSKDIE DVLILSGDHL YRMDYMDFIQ DHRQSGADIS ISCIPIDDRR ASDFGLMKID DKGRVISFSE KPKGDDLKAM AVDTTILGLS KEEAEKKPYI
301: ASMGVYVFKK EILLNLLRWR FPTANDFGSE IIPFSAKEFY VNAYLFNDYW EDIGTIRSFF EANLALTEHP GAFSFYDAAK PIYTSRRNLP PSKIDNSKLI
401: DSIISHGSFL TNCLIEHSIV GIRSRVGSNV QLKDTVMLGA DYYETEAEVA ALLAEGNVPI GIGENTKIQE CIIDKNARVG KNVIIANSEG IQEADRSSDG
501: FYIRSGITVI LKNSVIKDGV VI

Arabidopsis Description

ADG2Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55229]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.