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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • plastid 7
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:secretory
EpiLoc:plastid
iPSORT:secretory
MultiLoc:plastid
Plant-mPloc:plastid
Predotar:plastid
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
plastid: 17406793
plastid: 17189339
plasma membrane: 27800704
plastid: 27992503
gfp PMID: 17406793 doi
SK Lee, SK Hwang, M Han, JS Eom, HG Kang, Y Han, SB Choi, MH Cho, SH Bhoo, G An, TR Hahn, TW Okita, JS Jeon
Graduate School of Biotechnology & Plant Metabolism Research Center, Kyung Hee University, Yongin 446-701, Korea.
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 27992503 doi
S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
msms PMID: 17189339 doi
T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky
Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER90919 Sorghum plastid 86.69 87.38
TraesCS5B01G484700.1 Wheat plastid 85.32 86.85
TraesCS5D01G484500.2 Wheat plastid 84.93 85.94
TraesCS5A01G472000.1 Wheat plastid 84.74 85.74
Zm00001d033910_P002 Maize plastid 85.91 83.78
Solyc01g079790.2.1 Tomato nucleus, plastid 74.56 73.98
VIT_05s0020g02880.t01 Wine grape plastid 74.95 73.65
PGSC0003DMT400023304 Potato cytosol, plastid 74.17 73.59
Bra023713.1-P Field mustard plastid 73.58 72.87
CDY02573 Canola plastid 73.58 72.87
Bra002221.1-P Field mustard plastid 72.99 72.29
CDX92546 Canola plastid 72.99 72.29
CDY68209 Canola plastid 72.6 71.9
GSMUA_Achr1P11820_001 Banana plastid 76.13 71.64
HORVU0Hr1G033200.1 Barley plastid 41.29 71.53
AT5G19220.1 Thale cress plastid 72.8 71.26
KRH51050 Soybean nucleus, plastid 72.41 71.15
KRH02097 Soybean nucleus, plastid 72.21 70.55
HORVU1Hr1G001590.2 Barley plastid 28.77 70.33
HORVU7Hr1G093330.2 Barley plastid 33.66 70.2
CDY47206 Canola plastid 73.97 69.87
HORVU4Hr1G025240.1 Barley plastid 29.16 58.89
Os07t0243200-01 Rice plastid 58.32 58.55
Os05t0580000-01 Rice plastid 55.77 54.91
Os01t0633100-01 Rice plastid 53.03 52.32
Os09t0298200-01 Rice plastid 49.9 51.0
Os08t0345800-02 Rice plastid 49.9 49.61
Protein Annotations
KEGG:00500+2.7.7.27KEGG:00520+2.7.7.27Gene3D:2.160.10.10MapMan:3.2.2.3Gene3D:3.90.550.10EntrezGene:4334020
ProteinID:AAT78793.1ProteinID:ABF98731.1InterPro:ADP-Glc_PPaseInterPro:ADP_Glu_pyroP_CSEMBL:AK069296ProteinID:BAF13098.1
ProteinID:BAS86250.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005975GO:GO:0005978
GO:GO:0006091GO:GO:0008150GO:GO:0008152GO:GO:0008878GO:GO:0009058GO:GO:0009501
GO:GO:0009507GO:GO:0009536GO:GO:0009987GO:GO:0016740GO:GO:0016779GO:GO:0019252
InterPro:IPR029044EMBL:KT199366InterPro:NTP_transferase_domInterPro:Nucleotide-diphossugar_transEnsemblPlantsGene:Os03g0735000EnsemblPlants:Os03t0735000-01
PFAM:PF00483ScanProsite:PS00808ScanProsite:PS00809ScanProsite:PS00810PANTHER:PTHR43523PANTHER:PTHR43523:SF8
UniProt:Q6AVT2SUPFAM:SSF51161SUPFAM:SSF53448TIGRFAMs:TIGR02091InterPro:Trimer_LpxA-like_sfUniParc:UPI00003FE5B5
RefSeq:XP_015632018.1SEG:seg::::
Description
ADP-GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT 1Similar to Glucose-1-phosphate adenylyltransferase large subunit 2 (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPASE S) (Alpha-D-glucose-1-phosphate adenyl transferase) (BLPL) (Fragment). (Os03t0735000-01);Similar to Glucose-1-phosphate adenylyltransferase. (Os03t0735000-02)
Coordinates
chr3:-:30099372..30104572
Molecular Weight (calculated)
55430.2 Da
IEP (calculated)
7.430
GRAVY (calculated)
-0.129
Length
511 amino acids
Sequence
(BLAST)
001: MAAMDLRVAA PASVAAAARC GTSLARPWPA RAVGGGGGGG GRGRRLSVRT SVATTEAAAA AVGASEDAAL EARDSKTVVA VILGGGAGTR LFPLTKRRAK
101: PAVPIGGAYR LIDVPMSNCI NSGINKVYIL TQFNSASLNR HLSRAYNFSN GVAFGDGFVE VLAATQTPGS EGKRWFQGTA DAVRQFDWLF DDAKAKDIDD
201: VLILSGDHLY RMDYMDFVQS HRQRGADISI CCLPIDDSRA SDFGLMKIDD TGRVIAFSEK PKGDDLKAMQ VDTTVLGLPQ DEAKEKPYIA SMGVYIFKKE
301: ILLNLLRWRF PTANDFGSEI IPASAKEINV KAYLFNDYWE DIGTIKSFFE ANLSLAEQPP RFSFYDANKP MYTSRRNLPP SMINNSKITD SIISHGCFLD
401: SCRIEHSVVG IRSRIGSNVH LKDTVMLGAD FYETDLERGE LLAEGKVPIG IGENTKIQNC IIDKNARIGK NVTISNSEGV QEADRTSEGF YIRSGITIVL
501: KNSIIADGLV I
Best Arabidopsis Sequence Match ( AT5G19220.1 )
(BLAST)
001: MVVSADCRIS LSAPSCIRSS STGLTRHIKL GSFCNGELMG KKLNLSQLPN IRLRSSTNFS QKRILMSLNS VAGESKVQEL ETEKRDPRTV ASIILGGGAG
101: TRLFPLTKRR AKPAVPIGGA YRLIDVPMSN CINSGINKVY ILTQYNSASL NRHLARAYNS NGLGFGDGYV EVLAATQTPG ESGKRWFQGT ADAVRQFHWL
201: FEDARSKDIE DVLILSGDHL YRMDYMDFIQ DHRQSGADIS ISCIPIDDRR ASDFGLMKID DKGRVISFSE KPKGDDLKAM AVDTTILGLS KEEAEKKPYI
301: ASMGVYVFKK EILLNLLRWR FPTANDFGSE IIPFSAKEFY VNAYLFNDYW EDIGTIRSFF EANLALTEHP GAFSFYDAAK PIYTSRRNLP PSKIDNSKLI
401: DSIISHGSFL TNCLIEHSIV GIRSRVGSNV QLKDTVMLGA DYYETEAEVA ALLAEGNVPI GIGENTKIQE CIIDKNARVG KNVIIANSEG IQEADRSSDG
501: FYIRSGITVI LKNSVIKDGV VI
Arabidopsis Description
ADG2Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55229]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.