CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002221.1-P	Field mustard	plastid	100.0	100.0
CDY68209	Canola	plastid	99.03	99.03
CDY02573	Canola	plastid	95.16	95.16
AT5G19220.1	Thale cress	plastid	93.22	92.15
CDY47206	Canola	plastid	95.16	90.76
Solyc01g079790.2.1	Tomato	nucleus, plastid	80.62	80.78
PGSC0003DMT400023304	Potato	cytosol, plastid	80.23	80.39
VIT_05s0020g02880.t01	Wine grape	plastid	81.01	80.38
KRH51050	Soybean	nucleus, plastid	78.68	78.08
KRH02097	Soybean	nucleus, plastid	78.29	77.25
TraesCS5B01G484700.1	Wheat	plastid	71.9	73.9
Os03t0735000-01	Rice	plastid	72.29	72.99
TraesCS5D01G484500.2	Wheat	plastid	71.32	72.87
TraesCS5A01G472000.1	Wheat	plastid	71.32	72.87
EER90919	Sorghum	plastid	71.32	72.58
GSMUA_Achr1P11820_001	Banana	plastid	75.58	71.82
Zm00001d033910_P002	Maize	plastid	70.35	69.27
CDY41275	Canola	cytosol	43.22	69.25
HORVU0Hr1G033200.1	Barley	plastid	37.02	64.75
CDX84911	Canola	plastid	62.79	63.53
CDY27626	Canola	plastid	62.98	62.86
HORVU1Hr1G001590.2	Barley	plastid	25.0	61.72
HORVU7Hr1G093330.2	Barley	plastid	28.68	60.41
CDY15884	Canola	cytosol, plastid	57.95	57.5
CDX99581	Canola	cytosol, plastid	58.33	57.33
HORVU4Hr1G025240.1	Barley	plastid	25.78	52.57
CDY27884	Canola	plastid	51.55	51.15
CDY00843	Canola	plastid	51.36	50.96
CDY68655	Canola	plastid	50.19	50.68
CDX86314	Canola	plastid	50.0	50.29
CDY56761	Canola	endoplasmic reticulum	57.75	50.08
CDX72711	Canola	cytosol	57.36	46.84
CDY11773	Canola	endoplasmic reticulum, plastid, vacuole	11.05	41.91
CDY10130	Canola	plastid	35.66	38.17
CDY47264	Canola	plastid	34.88	37.34

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	GO:A0A078DTG9
InterPro:ADP-Glc_PPase	InterPro:ADP_Glu_pyroP_CS	EnsemblPlants:CDX92546	ProteinID:CDX92546	ProteinID:CDX92546.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0005978	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0008878	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0016740	GO:GO:0016779	GO:GO:0019252	EnsemblPlantsGene:GSBRNA2T00154330001	InterPro:IPR029044	InterPro:NTP_transferase_dom
InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483	ScanProsite:PS00808	ScanProsite:PS00809	ScanProsite:PS00810	PANTHER:PTHR43523
PANTHER:PTHR43523:SF8	MetaCyc:PWY-622	SUPFAM:SSF51161	SUPFAM:SSF53448	TIGRFAMs:TIGR02091	InterPro:Trimer_LpxA-like_sf
UniPathway:UPA00164	UniParc:UPI0002545191	:	:	:	:

Description

BnaA10g15850D

Coordinates

chrLK031872:+:1153476..1156506

Molecular Weight (calculated)

56849.1 Da

IEP (calculated)

8.432

GRAVY (calculated)

-0.191

Length

516 amino acids

Sequence
(BLAST)

001: MAVSADCRIS LSAPSCLRGS SGLTRHIKLG TFCNGELMGK KLNLSQLRSS STNLSKKKIQ MSLTSVAGET KVQETESEKR DPRTVASIIL GGGAGTRLFP
101: LTKRRAKPAV PIGGAYRLID VPMSNCINSG INKVYILTQY NSASLNRHLA RAYNSNGVFG DGFVEALAAT QTPGETGKRW FQGTADAVRQ FHWLFEDARS
201: KEIEDVLILS GDHLYRMDYM DFVQDHRQSG ADISISCIPI DDRRASDFGL MKIDEKGRVI SFSEKPKGDD LKAMAVDTTI LGLSKEEAEK KPYIASMGVY
301: VFKKEILLNL LRWRFPTAND FGSEIIPFSA KEFYVNAYLF NDYWEDIGTI RSFFEANLAL TEHPPAFSFY DAAKPIYTSR RNLPPSKIDG SKLIDSIISH
401: GSFLTNCLVE HSIVGIRSRI GSNVQLKDTV MLGADFYETE AEVASLLAEG KVPIGIGENT KIKECIIDKN ARVGKNVIIA NSEGVQEADR SSDGFYIRSG
501: ITVILKNSVI RDGAVI

Best Arabidopsis Sequence Match ( AT5G19220.1 )
(BLAST)

001: MVVSADCRIS LSAPSCIRSS STGLTRHIKL GSFCNGELMG KKLNLSQLPN IRLRSSTNFS QKRILMSLNS VAGESKVQEL ETEKRDPRTV ASIILGGGAG
101: TRLFPLTKRR AKPAVPIGGA YRLIDVPMSN CINSGINKVY ILTQYNSASL NRHLARAYNS NGLGFGDGYV EVLAATQTPG ESGKRWFQGT ADAVRQFHWL
201: FEDARSKDIE DVLILSGDHL YRMDYMDFIQ DHRQSGADIS ISCIPIDDRR ASDFGLMKID DKGRVISFSE KPKGDDLKAM AVDTTILGLS KEEAEKKPYI
301: ASMGVYVFKK EILLNLLRWR FPTANDFGSE IIPFSAKEFY VNAYLFNDYW EDIGTIRSFF EANLALTEHP GAFSFYDAAK PIYTSRRNLP PSKIDNSKLI
401: DSIISHGSFL TNCLIEHSIV GIRSRVGSNV QLKDTVMLGA DYYETEAEVA ALLAEGNVPI GIGENTKIQE CIIDKNARVG KNVIIANSEG IQEADRSSDG
501: FYIRSGITVI LKNSVIKDGV VI

Arabidopsis Description

ADG2Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55229]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.