CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015135.1-P	Field mustard	plastid	99.04	99.04
CDY27884	Canola	plastid	99.04	99.04
KRH14151	Soybean	cytosol	33.27	94.54
VIT_12s0057g01480.t01	Wine grape	plastid	88.27	90.18
KRH73984	Soybean	nucleus, plastid	88.85	89.71
Solyc12g011120.1.1	Tomato	plastid	74.42	87.56
KRH14152	Soybean	plastid	54.04	87.54
Solyc07g056140.2.1	Tomato	plastid	87.5	87.33
PGSC0003DMT400079823	Potato	cytosol, extracellular, plastid	87.12	86.95
CDX86314	Canola	plastid	85.77	86.94
CDY68655	Canola	plastid	85.38	86.89
TraesCS7B01G183300.1	Wheat	plastid	82.88	83.85
TraesCS7D01G284900.1	Wheat	plastid	82.69	83.66
HORVU7Hr1G067620.2	Barley	plastid	82.5	83.46
GSMUA_Achr1P09400_001	Banana	plastid	84.23	83.43
TraesCS7A01G287400.2	Wheat	golgi, plastid	82.12	83.4
Os08t0345800-02	Rice	plastid	82.31	83.27
KXG24924	Sorghum	plastid	82.5	82.98
Zm00001d032385_P001	Maize	plastid	82.5	82.98
PGSC0003DMT400097320	Potato	plastid	81.73	81.89
Os09t0298200-01	Rice	plastid	78.08	81.2
TraesCS5B01G175800.1	Wheat	plastid	78.08	81.04
TraesCS5D01G182600.1	Wheat	plastid	77.69	80.64
Zm00001d050032_P003	Maize	plastid	81.15	80.23
Zm00001d005546_P002	Maize	plastid	78.27	79.8
EER98661	Sorghum	plastid	78.08	79.61
Zm00001d023256_P001	Maize	cytosol	14.81	76.24
Zm00001d025723_P001	Maize	cytosol	44.42	54.35
CDX92546	Canola	plastid	50.96	51.36
CDY68209	Canola	plastid	50.77	51.16
CDY02573	Canola	plastid	50.58	50.97
CDY41275	Canola	cytosol	31.54	50.93
CDX84911	Canola	plastid	48.27	49.22
CDY27626	Canola	plastid	48.27	48.55
CDY47206	Canola	plastid	50.38	48.43
CDY15884	Canola	cytosol, plastid	47.31	47.31
CDX99581	Canola	cytosol, plastid	47.69	47.24
CDY10130	Canola	plastid	40.77	43.98
CDY47264	Canola	plastid	40.58	43.78
CDY56761	Canola	endoplasmic reticulum	46.73	40.84
CDX72711	Canola	cytosol	46.15	37.97
CDY11773	Canola	endoplasmic reticulum, plastid, vacuole	7.12	27.21

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	GO:A0A078EMY6
InterPro:ADP-Glc_PPase	InterPro:ADP_Glu_pyroP_CS	EnsemblPlants:CDY00843	ProteinID:CDY00843	ProteinID:CDY00843.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005975	GO:GO:0005978	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0008878	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0016779	GO:GO:0019252
EnsemblPlantsGene:GSBRNA2T00110776001	InterPro:IPR029044	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483	ScanProsite:PS00808
ScanProsite:PS00809	ScanProsite:PS00810	PANTHER:PTHR43523	PANTHER:PTHR43523:SF9	MetaCyc:PWY-622	SUPFAM:SSF51161
SUPFAM:SSF53448	TIGRFAMs:TIGR02091	InterPro:Trimer_LpxA-like_sf	UniPathway:UPA00164	UniParc:UPI0004EEE954	SEG:seg

Description

BnaCnng00430D

Coordinates

chrLK031922:-:582642..585188

Molecular Weight (calculated)

57073.2 Da

IEP (calculated)

6.334

GRAVY (calculated)

-0.216

Length

520 amino acids

Sequence
(BLAST)

001: MATMAAIGSL KVPSSSSNHT RRLSSSSQRK TLSFSSSSLA GEKINPTQEI IISNLPGRNE RRRPSIVSPK AVSDSQNSQT CLDPDASRSV LGIILGGGAG
101: TRLYPLTKKR AKPAVPLGAN YRLIDIPVSN CLNSNISKIY VLTQFNSASL NRHLSRAYAS NMGGYKNEGF VEVLAAQQSP ENPNWFQGTA DAVRQYLWLF
201: EEHNVLEFLV LAGDHLYRMD YEKFIQAHRE TDADITVAAL PMDEKRATAF GLMKIDDEGR IIEFAEKPKG EQLKAMKVDT TILGLDDERA KEMPFIASMG
301: IYVVSKNVML DLLRDQFPGA NDFGSEVIPG ATDLGLRVQA YLYDGYWEDI GTIEAFYNAN LGITKKPVPD FSFYDRSAPI YTQPRYLPPS KMLDADVTDS
401: VIGEGCVIKN CKIHHSVIGL RSCISEGAII EDTLLMGADY YETDADRTLL AAKGSIPIGI GRDSHIKRAI IDKNARIGDN VKIINTDNVQ EAARETDGYF
501: IKSGIVTVIK DALIPSGTVI

Best Arabidopsis Sequence Match ( AT5G48300.1 )
(BLAST)

001: MASVSAIGVL KVPPASTSNS TGKATEAVPT RTLSFSSSVT SSDDKISLKS TVSRLCKSVV RRNPIIVSPK AVSDSQNSQT CLDPDASSSV LGIILGGGAG
101: TRLYPLTKKR AKPAVPLGAN YRLIDIPVSN CLNSNISKIY VLTQFNSASL NRHLSRAYAS NMGGYKNEGF VEVLAAQQSP ENPNWFQGTA DAVRQYLWLF
201: EEHNVLEYLI LAGDHLYRMD YEKFIQAHRE TDADITVAAL PMDEQRATAF GLMKIDEEGR IIEFAEKPKG EHLKAMKVDT TILGLDDQRA KEMPFIASMG
301: IYVVSRDVML DLLRNQFPGA NDFGSEVIPG ATSLGLRVQA YLYDGYWEDI GTIEAFYNAN LGITKKPVPD FSFYDRSAPI YTQPRYLPPS KMLDADVTDS
401: VIGEGCVIKN CKIHHSVVGL RSCISEGAII EDSLLMGADY YETATEKSLL SAKGSVPIGI GKNSHIKRAI IDKNARIGDN VKIINSDNVQ EAARETDGYF
501: IKSGIVTVIK DALIPTGTVI

Arabidopsis Description

APS1Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55228]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.