CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032385_P001	Maize	plastid	97.1	97.1
Zm00001d050032_P003	Maize	plastid	94.97	93.35
TraesCS7D01G284900.1	Wheat	plastid	90.52	91.05
TraesCS7B01G183300.1	Wheat	plastid	90.52	91.05
TraesCS7A01G287400.2	Wheat	golgi, plastid	89.94	90.82
KRH14151	Soybean	cytosol	32.11	90.71
HORVU7Hr1G067620.2	Barley	plastid	90.14	90.66
Os08t0345800-02	Rice	plastid	88.97	89.49
Solyc12g011120.1.1	Tomato	plastid	72.92	85.29
Zm00001d023256_P001	Maize	cytosol	16.44	84.16
EER98661	Sorghum	plastid	82.2	83.33
KRH73984	Soybean	nucleus, plastid	82.79	83.11
VIT_12s0057g01480.t01	Wine grape	plastid	81.62	82.91
CDY00843	Canola	plastid	82.98	82.5
Bra015135.1-P	Field mustard	plastid	82.79	82.31
CDY27884	Canola	plastid	82.79	82.31
CDY68655	Canola	plastid	81.24	82.19
CDX86314	Canola	plastid	81.24	81.87
Bra037495.1-P	Field mustard	plastid	80.85	81.64
AT5G48300.1	Thale cress	plastid	81.82	81.35
Solyc07g056140.2.1	Tomato	plastid	81.62	81.0
PGSC0003DMT400079823	Potato	cytosol, extracellular, plastid	80.85	80.23
KRH14152	Soybean	plastid	49.13	79.13
GSMUA_Achr1P09400_001	Banana	plastid	79.88	78.67
PGSC0003DMT400097320	Potato	plastid	77.18	76.88
Zm00001d025723_P001	Maize	cytosol	47.78	58.12
EER90919	Sorghum	plastid	49.13	50.1
OQU88760	Sorghum	plastid	48.94	49.32
OQU87201	Sorghum	plastid	42.55	42.55
OQU78492	Sorghum	plastid	43.13	32.84

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	UniProt:A5Y409
ProteinID:ABK97531.1	ProteinID:ABK97532.1	ProteinID:ABK97533.1	ProteinID:ABK97534.1	ProteinID:ABK97535.1	ProteinID:ABK97537.1
ProteinID:ABK97539.1	ProteinID:ABK97540.1	ProteinID:ABK97549.1	ProteinID:ABK97550.1	InterPro:ADP-Glc_PPase	InterPro:ADP_Glu_pyroP_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0005978	GO:GO:0005982
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0008878	GO:GO:0009058	GO:GO:0009501
GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	GO:GO:0016779	GO:GO:0019252
InterPro:IPR029044	EnsemblPlants:KXG24924	ProteinID:KXG24924	ProteinID:KXG24924.1	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans
PFAM:PF00483	ScanProsite:PS00808	ScanProsite:PS00809	ScanProsite:PS00810	PANTHER:PTHR43523	PANTHER:PTHR43523:SF7
MetaCyc:PWY-622	EnsemblPlantsGene:SORBI_3007G101500	SUPFAM:SSF51161	SUPFAM:SSF53448	TIGRFAMs:TIGR02091	InterPro:Trimer_LpxA-like_sf
UniParc:UPI000156629A	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:25707997..25712978

Molecular Weight (calculated)

56456.5 Da

IEP (calculated)

7.371

GRAVY (calculated)

-0.184

Length

517 amino acids

Sequence
(BLAST)

001: MAMTAIASPS SRTLIPPRHH GAAPSPSTSG DSSLRLLRAH PRHGRRSRGV SVSTPAARSR PFVFSSRAVS DSKSSQTCLD PDASTSVLGI ILGGGAGTRL
101: YPLTKKRAKP AVPLGANYRL IDIPVSNCLN SNISKIYVLT QFNSASLNRH LSRAYGSNIG GYKNEGFVEV LAAQQSPDNP NWFQGTADAV RQYLWLFEEH
201: NVMEFLILAG DHLYRMDYEK FIQAHRETDA DITVAALPMD EARATAFGLM KIDEEGRIIE FAEKPKGEQL KAMMVDTTIL GLDDVRAKEM PYIASMGIYV
301: FSKDVMLQLL REQFPGANDF GSEVIPGATT IGKRVQAYLY DGYWEDIGTI TAFYNANLGI TKKPVPDFSF YDRSAPIYTQ PRHLPPSKVL DADVTDSVIG
401: EGCVIKNCKI HHSVVGLRSC ISEGAIIEDT LLMGADYYET EADKKLLAEN GGIPIGIGKN SHIRRAIIDK NARIGDNVKI LNADNVQEAA RETDGYFIKG
501: GIVTVIKDAL LPSGTVI

Best Arabidopsis Sequence Match ( AT5G48300.1 )
(BLAST)

001: MASVSAIGVL KVPPASTSNS TGKATEAVPT RTLSFSSSVT SSDDKISLKS TVSRLCKSVV RRNPIIVSPK AVSDSQNSQT CLDPDASSSV LGIILGGGAG
101: TRLYPLTKKR AKPAVPLGAN YRLIDIPVSN CLNSNISKIY VLTQFNSASL NRHLSRAYAS NMGGYKNEGF VEVLAAQQSP ENPNWFQGTA DAVRQYLWLF
201: EEHNVLEYLI LAGDHLYRMD YEKFIQAHRE TDADITVAAL PMDEQRATAF GLMKIDEEGR IIEFAEKPKG EHLKAMKVDT TILGLDDQRA KEMPFIASMG
301: IYVVSRDVML DLLRNQFPGA NDFGSEVIPG ATSLGLRVQA YLYDGYWEDI GTIEAFYNAN LGITKKPVPD FSFYDRSAPI YTQPRYLPPS KMLDADVTDS
401: VIGEGCVIKN CKIHHSVVGL RSCISEGAII EDSLLMGADY YETATEKSLL SAKGSVPIGI GKNSHIKRAI IDKNARIGDN VKIINSDNVQ EAARETDGYF
501: IKSGIVTVIK DALIPTGTVI

Arabidopsis Description

APS1Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55228]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.