CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0580000-01	Rice	plastid	70.84	92.68
HORVU1Hr1G091600.9	Barley	plastid	69.66	90.1
Zm00001d039131_P007	Maize	plastid	73.78	89.78
TraesCS1B01G449700.2	Wheat	plastid	69.22	89.02
TraesCS1A01G419600.2	Wheat	plastid	65.98	82.81
TraesCS1D01G427400.2	Wheat	plastid	65.83	82.62
OQU87201	Sorghum	plastid	54.79	71.95
CDY41275	Canola	cytosol	32.84	69.25
GSMUA_Achr4P10620_001	Banana	mitochondrion, vacuole	46.39	68.18
GSMUA_Achr4P02930_001	Banana	mitochondrion	45.8	68.05
GSMUA_Achr9P06920_001	Banana	cytosol	51.55	67.44
GSMUA_Achr6P27190_001	Banana	cytosol, nucleus, plastid	50.52	65.46
VIT_18s0001g12840.t01	Wine grape	plastid	49.19	63.74
KRH61137	Soybean	plastid	49.48	63.4
KRH51516	Soybean	plastid	48.16	63.01
KRH51829	Soybean	plastid	49.19	62.9
KRH24456	Soybean	plastid	48.9	62.88
KRH29435	Soybean	cytosol	49.04	62.83
Solyc01g109790.2.1	Tomato	extracellular	48.45	62.79
KRH60824	Soybean	plastid	47.86	62.62
PGSC0003DMT400001935	Potato	plastid	46.1	62.6
VIT_03s0038g04570.t01	Wine grape	cytosol	48.45	62.43
PGSC0003DMT400041215	Potato	plastid	47.57	62.0
CDX84911	Canola	plastid	46.54	61.96
CDY27626	Canola	plastid	47.13	61.9
Bra032842.1-P	Field mustard	plastid	47.13	61.9
Solyc07g019440.2.1	Tomato	plastid	46.98	61.58
AT1G27680.1	Thale cress	plastid	46.83	61.39
AT2G21590.4	Thale cress	plastid	45.95	59.66
Bra033604.1-P	Field mustard	cytosol, plastid	45.95	59.66
KRH15167	Soybean	mitochondrion, plastid	45.8	59.46
KRH05853	Soybean	plastid	45.8	59.35
CDY15884	Canola	cytosol, plastid	44.92	58.65
Bra030291.1-P	Field mustard	cytosol, plastid	44.92	58.65
AT4G39210.1	Thale cress	plastid	44.92	58.54
CDX99581	Canola	cytosol, plastid	45.21	58.48
OQU88760	Sorghum	plastid	42.42	56.14
EER90919	Sorghum	plastid	40.35	54.04
CDY56761	Canola	endoplasmic reticulum	46.39	52.94
CDX72711	Canola	cytosol	46.24	49.68
EER98661	Sorghum	plastid	32.99	43.92
KXG24924	Sorghum	plastid	32.84	43.13
CDY11773	Canola	endoplasmic reticulum, plastid, vacuole	8.39	41.91

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	UniProt:A0A1Z5R3X9
InterPro:ADP-Glc_PPase	InterPro:ADP_Glu_pyroP_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975
GO:GO:0005978	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0008878	GO:GO:0009058
GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	GO:GO:0016779	GO:GO:0019252
InterPro:IPR029044	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	EnsemblPlants:OQU78492	ProteinID:OQU78492	ProteinID:OQU78492.1
PFAM:PF00483	ScanProsite:PS00808	ScanProsite:PS00809	ScanProsite:PS00810	PANTHER:PTHR43523	PANTHER:PTHR43523:SF4
EnsemblPlantsGene:SORBI_3009G245000	SUPFAM:SSF51161	SUPFAM:SSF53448	TIGRFAMs:TIGR02091	InterPro:Trimer_LpxA-like_sf	UniParc:UPI000B8BB0AE
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:58073718..58079719

Molecular Weight (calculated)

75016.9 Da

IEP (calculated)

8.964

GRAVY (calculated)

-0.223

Length

679 amino acids

Sequence
(BLAST)

001: MEPIMQAIDD EAIFWSGKTQ KRTVPAAGVR VTPDGERWRG AGAARGAGQG RAGHTRSAKR CRGHLLHRSS VHSVPISIFH FAICLGVVPL FPTPSNSNAT
101: AAPRFISRRP RHITTVSHRR GHPFSSSLTS DSRRHRSIHP PVGCSFFPSV RRSVPRCASA MQFSSVFPLE GKACMSPVRR GGEGAWSERV RIGNSCSIRR
201: NKALRRMCFG ARGAVSSAQC VLTSDAGPDT LVVRTSFRRN YADPNEVAAV ILGGGTGTQL FPLTSTRATP AVPIGGCYRL IDIPMSNCFN SGINKIFVMT
301: QFNSASLNRH IHRTYLGGGI NFTDGSVEVL AATQMPGEAA GWFQGTADAV RKFIWVLEDY YKHKAIEHIL ILSGDQLYRM DYMELVQKHV DDNADITLSC
401: APVGESRASD YGLVKFDSSG RVIQFSEKPK GAALEEMKVD TSFLNFAIDD PTKYPYIASM GVYVFKRDVL LDLLKSRYAE LHDFGSEILP KALHEHNVQA
501: YVFTDYWEDI GTIRSFFDAN MALCEQPPKF EFYDPKTPFF TSPRYLPPTK SDKCRIKDAI ISHGCFLREC AIEHSIVGVR SRLNSGCELK NTMMMGADLY
601: ETEDEISRLL SEGKVPIGVG ENTKISNCII DMNARVGRNV SITNTEGVQE ADRPELGYYI RSGIVVILKN ATIKDGTVI

Best Arabidopsis Sequence Match ( AT1G27680.1 )
(BLAST)

001: MESCFPAMKL NQCTFGLNNE IVSERVSAFW GTQVVKPNHL RTTKLRSAPQ KKIQTNLIRS VLTPFVDQES HEPLLRTQNA DPKNVASIIL GGGAGTRLFP
101: LTSKRAKPAV PIGGCYRLID IPMSNCINSG IRKIFILTQF NSFSLNRHLS RTYNFGNGVN FGDGFVEVLA ATQTSGDAGK KWFQGTADAV RQFIWVFEDA
201: KTKNVEHVLI LSGDHLYRMD YMNFVQKHIE SNADITVSCL PMDESRASDF GLLKIDQSGK IIQFSEKPKG DDLKAMQVDT SILGLPPKEA AESPYIASMG
301: VYVFRKEVLL KLLRSSYPTS NDFGSEIIPL AVGEHNVQAF LFNDYWEDIG TIGSFFDANL ALTEQPPKFQ FYDQKTPFFT SPRFLPPTKV DKCRILDSIV
401: SHGCFLRECS VQHSIVGIRS RLESGVELQD TMMMGADFYQ TEAEIASLLA EGKVPVGVGQ NTKIKNCIID KNAKIGKNVV IANADGVEEG DRPEEGFHIR
501: SGITVVLKNA TIRDGLHI

Arabidopsis Description

APL2Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55230]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.