CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29435	Soybean	cytosol	97.35	96.98
KRH51516	Soybean	plastid	85.8	87.28
KRH60824	Soybean	plastid	85.23	86.71
VIT_03s0038g04570.t01	Wine grape	cytosol	77.46	77.61
Solyc01g109790.2.1	Tomato	extracellular	72.92	73.47
PGSC0003DMT400001935	Potato	plastid	69.13	73.0
Bra033604.1-P	Field mustard	cytosol, plastid	71.97	72.66
AT4G39210.1	Thale cress	plastid	70.83	71.78
Bra030291.1-P	Field mustard	cytosol, plastid	70.64	71.73
AT2G21590.4	Thale cress	plastid	71.02	71.7
CDY15884	Canola	cytosol, plastid	70.45	71.54
KRH51829	Soybean	plastid	71.59	71.19
CDX99581	Canola	cytosol, plastid	70.64	71.05
GSMUA_Achr4P02930_001	Banana	mitochondrion	60.61	70.02
KRH61137	Soybean	plastid	70.27	70.0
GSMUA_Achr4P10620_001	Banana	mitochondrion, vacuole	61.17	69.91
GSMUA_Achr9P06920_001	Banana	cytosol	67.42	68.59
GSMUA_Achr6P27190_001	Banana	cytosol, nucleus, plastid	67.23	67.75
KRH15167	Soybean	mitochondrion, plastid	65.15	65.77
KRH05853	Soybean	plastid	63.83	64.31
CDY56761	Canola	endoplasmic reticulum	72.16	64.03
Os05t0580000-01	Rice	plastid	62.69	63.78
HORVU1Hr1G091600.9	Barley	plastid	62.31	62.67
TraesCS1B01G449700.2	Wheat	plastid	61.93	61.93
KRG96634	Soybean	plastid	61.74	61.63
KRH68365	Soybean	plastid	61.17	61.06
Zm00001d039131_P007	Maize	plastid	63.45	60.04
CDX72711	Canola	cytosol	71.4	59.65
Os01t0633100-01	Rice	plastid	58.14	59.27
OQU87201	Sorghum	plastid	56.82	58.03
KRH51050	Soybean	nucleus, plastid	56.63	57.5
KRH02097	Soybean	nucleus, plastid	56.63	57.17
TraesCS1A01G419600.2	Wheat	plastid	58.52	57.12
TraesCS1D01G427400.2	Wheat	plastid	58.33	56.93
KRH14151	Soybean	cytosol	18.18	52.46
OQU78492	Sorghum	plastid	62.88	48.9
KRH73984	Soybean	nucleus, plastid	47.54	48.74
KRH14152	Soybean	plastid	28.79	47.35
Zm00001d044129_P001	Maize	cytosol, nucleus, plastid	55.11	44.22

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	EntrezGene:100808791	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10
EMBL:ACUP02007176	InterPro:ADP-Glc_PPase	InterPro:ADP_Glu_pyroP_CS	EnsemblPlantsGene:GLYMA_12G042400	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005975	GO:GO:0005978	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0008878	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016740
GO:GO:0016779	GO:GO:0019252	UniProt:I1LQ25	InterPro:IPR029044	ProteinID:KRH24455.1	EnsemblPlants:KRH24456
ProteinID:KRH24456	ProteinID:KRH24456.1	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483	ScanProsite:PS00809
ScanProsite:PS00810	PANTHER:PTHR43523	PANTHER:PTHR43523:SF4	MetaCyc:PWY-622	SUPFAM:SSF51161	SUPFAM:SSF53448
TIGRFAMs:TIGR02091	InterPro:Trimer_LpxA-like_sf	UniParc:UPI000233D1C4	:	:	:

Description

hypothetical protein

Coordinates

chr12:+:3059633..3065080

Molecular Weight (calculated)

58505.2 Da

IEP (calculated)

8.434

GRAVY (calculated)

-0.202

Length

528 amino acids

Sequence
(BLAST)

001: MVSACVTLKA NTHLVKSRKD NTFRQDSGFL GERIKGGLNY SPWIINQLAS SLRTQERVKK AKPGVVSAVL TSSNTKESVA FQMPSFLRRK ADPKNVVSII
101: LGGGPGIQLF PLTKRAATPA VPVGGCYRLI DIPMSNCINS GLNKIFVLTQ FNSASLNRHI SRTYFGNGIN FGDGCVEVLA ATQTQGETGK NWFQGTADAV
201: RQFTWVFEDA KHTNIENVLI LAGDHLYRMD YMDLVQSHVD RNADITVSCA AVGESRASDY GLVKADGRGR IIQFSEKPKG ADLKAMQVDT SVLGLPPHEA
301: KRSPYIASMG VYVFKTDVLL KLLKWRYPTS NDFGSEIIPA AVRENNVQAY FFNDYWEDIG TIKSFYDANL ALTEENPMFK FYDPKTPIYT SPRFLPPTKI
401: DKCRIVDAII SHGCFLRECT VQHSIVGERS RLDYGVELQD TVMMGADYYQ TESEIASLLA EGKVPIGIGR NTKIRNCIID KNAKIGKDVI IMNKDGVQEA
501: DRPEDGFYIR SGITVILEKA TIEDGTVI

Best Arabidopsis Sequence Match ( AT4G39210.1 )
(BLAST)

001: MDSCCNFSLG TKTVLAKDSF KNVENKFLGE KIKGSVLKPF SSDLSSKKFR NRKLRPGVAY AIATSKNAKE ALKNQPSMFE RRRADPKNVA AIILGGGDGA
101: KLFPLTKRAA TPAVPVGGCY RMIDIPMSNC INSCINKIFV LTQFNSASLN RHLARTYFGN GINFGDGFVE VLAATQTPGE AGKKWFQGTA DAVRKFLWVF
201: EDAKNRNIEN IIILSGDHLY RMNYMDFVQH HVDSKADITL SCAPVDESRA SEYGLVNIDR SGRVVHFSEK PTGIDLKSMQ TDTTMHGLSH QEAAKSPYIA
301: SMGVYCFKTE ALLKLLTWRY PSSNDFGSEI IPAAIKDHNV QGYIYRDYWE DIGTIKSFYE ANIALVEEHP KFEFYDQNTP FYTSPRFLPP TKTEKCRIVN
401: SVISHGCFLG ECSIQRSIIG ERSRLDYGVE LQDTLMLGAD SYQTESEIAS LLAEGNVPIG IGRDTKIRKC IIDKNAKIGK NVVIMNKDDV KEADRPEEGF
501: YIRSGITVVV EKATIKDGTV I

Arabidopsis Description

APL3Glucose-1-phosphate adenylyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178US50]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.