Factsheet for Bra030291.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

plastid 5
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15884	Canola	cytosol, plastid	98.85	98.85
AT2G21590.4	Thale cress	plastid	90.38	89.87
Bra033604.1-P	Field mustard	cytosol, plastid	83.65	83.17
KRH60824	Soybean	plastid	70.58	70.71
KRH51516	Soybean	plastid	70.58	70.71
KRH24456	Soybean	plastid	71.73	70.64
KRH29435	Soybean	cytosol	71.73	70.38
Solyc01g109790.2.1	Tomato	extracellular	69.62	69.08
VIT_03s0038g04570.t01	Wine grape	cytosol	69.81	68.88
PGSC0003DMT400001935	Potato	plastid	65.77	68.4
GSMUA_Achr4P02930_001	Banana	mitochondrion	59.04	67.18
GSMUA_Achr4P10620_001	Banana	mitochondrion, vacuole	57.88	65.15
Bra032842.1-P	Field mustard	plastid	63.46	63.83
GSMUA_Achr9P06920_001	Banana	cytosol	62.69	62.81
GSMUA_Achr6P27190_001	Banana	cytosol, nucleus, plastid	61.92	61.45
Bra002221.1-P	Field mustard	plastid	58.08	58.53
Os05t0580000-01	Rice	plastid	57.88	58.0
Bra023713.1-P	Field mustard	plastid	57.31	57.75
HORVU1Hr1G091600.9	Barley	plastid	58.08	57.52
TraesCS1B01G449700.2	Wheat	plastid	58.27	57.39
Zm00001d039131_P007	Maize	plastid	59.04	55.02
OQU87201	Sorghum	plastid	54.42	54.74
Os01t0633100-01	Rice	plastid	54.23	54.44
TraesCS1A01G419600.2	Wheat	plastid	54.62	52.5
TraesCS1D01G427400.2	Wheat	plastid	54.62	52.5
Bra015135.1-P	Field mustard	plastid	47.5	47.5
Bra037495.1-P	Field mustard	plastid	46.73	47.46
OQU78492	Sorghum	plastid	58.65	44.92
Zm00001d044129_P001	Maize	cytosol, nucleus, plastid	53.27	42.1
Bra015444.1-P	Field mustard	plastid	32.69	35.27

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	InterPro:ADP-Glc_PPase
InterPro:ADP_Glu_pyroP_CS	EnsemblPlantsGene:Bra030291	EnsemblPlants:Bra030291.1	EnsemblPlants:Bra030291.1-P	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0005978	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0008878	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0010170	GO:GO:0016740	GO:GO:0016779	GO:GO:0019252	InterPro:IPR029044	UniProt:M4ENC1
InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483	ScanProsite:PS00808	ScanProsite:PS00809	ScanProsite:PS00810
PANTHER:PTHR43523	PANTHER:PTHR43523:SF4	SUPFAM:SSF51161	SUPFAM:SSF53448	TIGRFAMs:TIGR02091	InterPro:Trimer_LpxA-like_sf
UniParc:UPI0002543E15	SEG:seg	:	:	:	:

Description

AT2G21590 (E=2e-270) APL4 | APL4; glucose-1-phosphate adenylyltransferase

Coordinates

chrA04:+:9323518..9326223

Molecular Weight (calculated)

57844.1 Da

IEP (calculated)

7.898

GRAVY (calculated)

-0.275

Length

520 amino acids

Sequence
(BLAST)

001: MDSSHCFATG KSTSVLPKLT FKNVDNKFWG EKIKSNGFFK RLNSNQFGNR KFKHGGVVYA VATSKNPNEA MIVKPSMFEK RKADPKNVAA IILGGGNGAQ
101: LFPLTKRAAT PAVPVGGCYR LIDIPMSNCI NSCINKIFVL TQFNSASLNR HLARTYFGNG INFGGGFVEV LAATQTPGEA GKKWFQGTAD AVRKFLWVFE
201: DAKNRNIENI LILSGDHLYR MNYMDFVQSH VDSNADVTLS CAPVSERRAS NFGLVKIDRG GRVTHFSEKP TGVDLKSMQT DTTMLGLSHE EATDSPYIAS
301: MGVYCFKTEA LLDLLTQQYP TSNDFGSEVI PAAIRDQDVQ GYIFRDYWED IGTIKTFYEA NLALVEERPK FEFYDPDTPF YTSPRFLPPT KTEKCRMVDS
401: IISHGCFMRE CSVQRSIIGE RSRLDYGVEL QDTLMLGADY YQTESEIASL LAEGKVPIGI GQDSKIRKCI IDKNAKIGKN VIIMNKGDVQ EADRPEEGFY
501: IRSGITVVVE KATIQDGTVI

Best Arabidopsis Sequence Match ( AT2G21590.2 )
(BLAST)

001: MDSSYSFALG TSSSILPKLS FRNVENRFYG EKNNNNGLCK RFGSDLGSKK FRNQKFKHGV VYAVATSDNP KKAMTVKTSM FERRKVDPQN VAAIILGGGN
101: GAKLFPLTMR AATPAVPVGG CYRLIDIPMS NCINSCINKI FVLTQFNSAS LNRHLARTYF GNGINFGGGF VEVLAATQTP GEAGKKWFQG TADAVRKFLW
201: VFEDAKNRNI ENILILSGDH LYRMNYMDFV QSHVDSNADI TLSCAPVSES RASNFGLVKI DRGGRVIHFS EKPTGVDLKS MQTDTTMLGL SHQEATDSPY
301: IASMGVYCFK TEALLNLLTR QYPSSNDFGS EVIPAAIRDH DVQGYIFRDY WEDIGTIKTF YEANLALVEE RPKFEFYDPE TPFYTSPRFL PPTKAEKCRM
401: VDSIISHGCF LRECSVQRSI IGERSRLDYG VELQDTLMLG ADYYQTESEI ASLLAEGKVP IGIGKDTKIR KCIIDKNAKI GKNVIIMNKG DVQEADRPEE
501: GFYIRSGITV IVEKATIQDG TVI

Arabidopsis Description

APL4Probable glucose-1-phosphate adenylyltransferase large subunit, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SIK1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.