CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 4
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH24456	Soybean	plastid	96.98	97.35
KRH51516	Soybean	plastid	84.34	86.13
KRH60824	Soybean	plastid	83.96	85.74
VIT_03s0038g04570.t01	Wine grape	cytosol	76.42	76.85
Solyc01g109790.2.1	Tomato	extracellular	72.08	72.9
PGSC0003DMT400001935	Potato	plastid	68.68	72.8
Bra033604.1-P	Field mustard	cytosol, plastid	71.32	72.28
Bra030291.1-P	Field mustard	cytosol, plastid	70.38	71.73
CDY15884	Canola	cytosol, plastid	70.19	71.54
AT2G21590.4	Thale cress	plastid	70.57	71.51
AT4G39210.1	Thale cress	plastid	70.19	71.4
CDX99581	Canola	cytosol, plastid	70.38	71.05
KRH51829	Soybean	plastid	70.19	70.06
GSMUA_Achr4P02930_001	Banana	mitochondrion	60.0	69.58
GSMUA_Achr4P10620_001	Banana	mitochondrion, vacuole	60.38	69.26
KRH61137	Soybean	plastid	68.87	68.87
GSMUA_Achr9P06920_001	Banana	cytosol	66.23	67.63
GSMUA_Achr6P27190_001	Banana	cytosol, nucleus, plastid	66.42	67.18
KRH15167	Soybean	mitochondrion, plastid	64.53	65.39
Os05t0580000-01	Rice	plastid	62.64	63.97
KRH05853	Soybean	plastid	63.02	63.74
CDY56761	Canola	endoplasmic reticulum	71.51	63.7
HORVU1Hr1G091600.9	Barley	plastid	62.08	62.67
TraesCS1B01G449700.2	Wheat	plastid	61.7	61.93
KRG96634	Soybean	plastid	60.19	60.3
Zm00001d039131_P007	Maize	plastid	63.02	59.86
Os01t0633100-01	Rice	plastid	58.49	59.85
KRH68365	Soybean	plastid	59.62	59.74
CDX72711	Canola	cytosol	70.75	59.34
OQU87201	Sorghum	plastid	56.42	57.83
KRH51050	Soybean	nucleus, plastid	56.23	57.31
TraesCS1A01G419600.2	Wheat	plastid	58.3	57.12
KRH02097	Soybean	nucleus, plastid	56.23	56.98
TraesCS1D01G427400.2	Wheat	plastid	58.11	56.93
KRH14151	Soybean	cytosol	18.11	52.46
OQU78492	Sorghum	plastid	62.83	49.04
KRH73984	Soybean	nucleus, plastid	46.79	48.16
KRH14152	Soybean	plastid	28.11	46.42
Zm00001d044129_P001	Maize	cytosol, nucleus, plastid	54.72	44.07

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	EntrezGene:100790220	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10
EMBL:ACUP02006800	InterPro:ADP-Glc_PPase	InterPro:ADP_Glu_pyroP_CS	EnsemblPlantsGene:GLYMA_11G116600	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005975	GO:GO:0005978	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0008878	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016740
GO:GO:0016779	GO:GO:0019252	UniProt:I1LJC2	InterPro:IPR029044	EnsemblPlants:KRH29435	ProteinID:KRH29435
ProteinID:KRH29435.1	ProteinID:KRH29436.1	ProteinID:KRH29437.1	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483
ScanProsite:PS00809	ScanProsite:PS00810	PANTHER:PTHR43523	PANTHER:PTHR43523:SF4	MetaCyc:PWY-622	SUPFAM:SSF51161
SUPFAM:SSF53448	TIGRFAMs:TIGR02091	InterPro:Trimer_LpxA-like_sf	UniParc:UPI0001CAB9EA	:	:

Description

hypothetical protein

Coordinates

chr11:+:8869004..8874560

Molecular Weight (calculated)

58587.3 Da

IEP (calculated)

8.127

GRAVY (calculated)

-0.153

Length

530 amino acids

Sequence
(BLAST)

001: MVSACVTLKA NTHLVKSRKD NTFRQDGGFL GERIKGGLNY SPWIINQLAS TSSLRTQEKV NKAKPGVVSA VLTSSNIKES VAFQMPSFLR RKADPKNVVS
101: VILGGGPGIQ LFPLTKRAAT PAVPVGGCYR LIDIPMSNCI NSGLNKIFVL TQFNSASLNR HISRTYFGNG INFGDGCVEV LAATQTQGEA GNNWFQGTAD
201: AVRQFTWVFE DAKHANIENV LILAGDHLYR MNYMDLVQSH VDRNADITVS CAAVGESRAS DYGLVKADAR GRIIQFSEKP NGADLKAMQV DTSVLGLPLH
301: EAKRSPYIAS MGVYVFKTDV LLRLLKWRYP TSNDFGSEII PAAVRENNVQ AYFFIDYWED IGTIKSFYDA NLALTEENPM FKFYDPKTPI YTSPRFLPPT
401: KIDKCRIVDA IISHGCFLRE CTVQHSIVGE RSRLDYGVEL QDTVMMGADY YQTESEIASL LAEGKVPIGI GRNTKIRNCI IDKNAKIGKD VIIMNKDGVQ
501: EADRPEDGFY IRSGITVILE KATIEDGTVI

Best Arabidopsis Sequence Match ( AT2G21590.2 )
(BLAST)

001: MDSSYSFALG TSSSILPKLS FRNVENRFYG EKNNNNGLCK RFGSDLGSKK FRNQKFKHGV VYAVATSDNP KKAMTVKTSM FERRKVDPQN VAAIILGGGN
101: GAKLFPLTMR AATPAVPVGG CYRLIDIPMS NCINSCINKI FVLTQFNSAS LNRHLARTYF GNGINFGGGF VEVLAATQTP GEAGKKWFQG TADAVRKFLW
201: VFEDAKNRNI ENILILSGDH LYRMNYMDFV QSHVDSNADI TLSCAPVSES RASNFGLVKI DRGGRVIHFS EKPTGVDLKS MQTDTTMLGL SHQEATDSPY
301: IASMGVYCFK TEALLNLLTR QYPSSNDFGS EVIPAAIRDH DVQGYIFRDY WEDIGTIKTF YEANLALVEE RPKFEFYDPE TPFYTSPRFL PPTKAEKCRM
401: VDSIISHGCF LRECSVQRSI IGERSRLDYG VELQDTLMLG ADYYQTESEI ASLLAEGKVP IGIGKDTKIR KCIIDKNAKI GKNVIIMNKG DVQEADRPEE
501: GFYIRSGITV IVEKATIQDG TVI

Arabidopsis Description

APL4Probable glucose-1-phosphate adenylyltransferase large subunit, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SIK1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.