CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G39210.1	Thale cress	plastid	75.47	91.55
CDY56761	Canola	endoplasmic reticulum	85.76	91.09
CDX99581	Canola	cytosol, plastid	69.15	83.24
CDY15884	Canola	cytosol, plastid	68.2	82.88
KRH51516	Soybean	plastid	59.18	72.06
KRH60824	Soybean	plastid	59.02	71.87
VIT_03s0038g04570.t01	Wine grape	cytosol	59.81	71.73
KRH24456	Soybean	plastid	59.65	71.4
Solyc01g109790.2.1	Tomato	extracellular	58.7	70.8
PGSC0003DMT400001935	Potato	plastid	56.01	70.8
KRH29435	Soybean	cytosol	59.34	70.75
CDY41275	Canola	cytosol	35.44	69.57
GSMUA_Achr4P02930_001	Banana	mitochondrion	48.42	66.96
GSMUA_Achr4P10620_001	Banana	mitochondrion, vacuole	48.26	66.02
CDX84911	Canola	plastid	52.22	64.71
CDY27626	Canola	plastid	52.53	64.22
GSMUA_Achr9P06920_001	Banana	cytosol	52.69	64.16
GSMUA_Achr6P27190_001	Banana	cytosol, nucleus, plastid	52.06	62.79
HORVU1Hr1G091600.9	Barley	plastid	49.68	59.81
TraesCS1B01G449700.2	Wheat	plastid	49.84	59.66
Os05t0580000-01	Rice	plastid	48.89	59.54
CDY68209	Canola	plastid	46.84	57.36
CDX92546	Canola	plastid	46.84	57.36
CDY02573	Canola	plastid	46.84	57.36
Os01t0633100-01	Rice	plastid	46.2	56.37
Zm00001d039131_P007	Maize	plastid	49.21	55.73
OQU87201	Sorghum	plastid	45.09	55.13
TraesCS1D01G427400.2	Wheat	plastid	46.84	54.71
CDY47206	Canola	plastid	46.84	54.71
TraesCS1A01G419600.2	Wheat	plastid	46.84	54.71
CDY68655	Canola	plastid	37.82	46.77
CDX86314	Canola	plastid	37.82	46.59
OQU78492	Sorghum	plastid	49.68	46.24
CDY00843	Canola	plastid	37.97	46.15
CDY27884	Canola	plastid	37.66	45.77
Zm00001d044129_P001	Maize	cytosol, nucleus, plastid	44.94	43.16
CDY10130	Canola	plastid	27.37	35.89
CDY47264	Canola	plastid	27.22	35.68
CDY11773	Canola	endoplasmic reticulum, plastid, vacuole	7.59	35.29

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	GO:A0A078C6K5
InterPro:ADP-Glc_PPase	InterPro:ADP_Glu_pyroP_CS	EnsemblPlants:CDX72711	ProteinID:CDX72711	ProteinID:CDX72711.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005975	GO:GO:0005978	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0008878	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0016779	GO:GO:0019252
EnsemblPlantsGene:GSBRNA2T00100304001	InterPro:IPR029044	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483	ScanProsite:PS00808
ScanProsite:PS00809	ScanProsite:PS00810	PANTHER:PTHR43523	PANTHER:PTHR43523:SF4	MetaCyc:PWY-622	SUPFAM:SSF51161
SUPFAM:SSF53448	TIGRFAMs:TIGR02091	InterPro:Trimer_LpxA-like_sf	UniPathway:UPA00164	UniParc:UPI0004EF3C59	SEG:seg

Description

BnaC07g47330D

Coordinates

chrLK031796:-:2767177..2771433

Molecular Weight (calculated)

71285.1 Da

IEP (calculated)

9.157

GRAVY (calculated)

-0.385

Length

632 amino acids

Sequence
(BLAST)

001: MGIEWAWAHI QVDRTVVERH MSRGKKYGRK ESRSFWFSDL HCQTQTPMPL FEKERERRIK KYRINKRSSF GSSSLITSPR SLLWVHERHI TLNQNQTIRI
101: RSLHSVSFQM DSCCYSGLGT KTVLSKDGYK NVENRFWGEK IKGSFSKPFA SDSSSKEFSF RKSSRPGVAY AVATSKNTKE ALRLEPSMLG ERRKADPKNV
201: AAIILGGGNG AKLFPLTKRA ATPAVPVGGC YRMIDIPMSN CINSCINKIF VLTQFNSASL NRHLARTYFG NGINFGDGFV EVLAATQTPG EAGKKWFQGT
301: ADAVRKFLWV FEDAKNRNIE NIIILSGDHL YRMNYMDFVQ YHVDSNADIT LSCAPVGESR ASDYGLVNID RSGRVVHFYE KPTGIDLKSM QSDTTMLGLS
401: QQEAVKSPYI ASMGVYCFKT EALLKLLTRR YPSSNDFGSE IIPAAIRDHN VQGYVYRDYW EDIGTIKSFY EANLALIEEH PKFEFYDQDT PFYTSPRFLP
501: PTKTEKCRIV NSIISHGCFL GECSIQRSII GERSRLDYGV ELQDTLMLGA DSYQTESEIA SLLAEGNVPI GIGRDTKIRK CIIDKNAKIG KNVMILNNDD
601: VQEADRPEEG FYIRSGITVV VEKATIKDGT VI

Best Arabidopsis Sequence Match ( AT4G39210.1 )
(BLAST)

001: MDSCCNFSLG TKTVLAKDSF KNVENKFLGE KIKGSVLKPF SSDLSSKKFR NRKLRPGVAY AIATSKNAKE ALKNQPSMFE RRRADPKNVA AIILGGGDGA
101: KLFPLTKRAA TPAVPVGGCY RMIDIPMSNC INSCINKIFV LTQFNSASLN RHLARTYFGN GINFGDGFVE VLAATQTPGE AGKKWFQGTA DAVRKFLWVF
201: EDAKNRNIEN IIILSGDHLY RMNYMDFVQH HVDSKADITL SCAPVDESRA SEYGLVNIDR SGRVVHFSEK PTGIDLKSMQ TDTTMHGLSH QEAAKSPYIA
301: SMGVYCFKTE ALLKLLTWRY PSSNDFGSEI IPAAIKDHNV QGYIYRDYWE DIGTIKSFYE ANIALVEEHP KFEFYDQNTP FYTSPRFLPP TKTEKCRIVN
401: SVISHGCFLG ECSIQRSIIG ERSRLDYGVE LQDTLMLGAD SYQTESEIAS LLAEGNVPIG IGRDTKIRKC IIDKNAKIGK NVVIMNKDDV KEADRPEEGF
501: YIRSGITVVV EKATIKDGTV I

Arabidopsis Description

APL3Glucose-1-phosphate adenylyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178US50]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.