CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032842.1-P	Field mustard	plastid	100.0	100.0
CDY41275	Canola	cytosol	61.7	99.07
CDX84911	Canola	plastid	96.33	97.65
AT1G27680.1	Thale cress	plastid	91.1	90.93
VIT_18s0001g12840.t01	Wine grape	plastid	74.47	73.47
KRH61137	Soybean	plastid	74.47	72.64
KRH51829	Soybean	plastid	74.47	72.5
PGSC0003DMT400041215	Potato	plastid	71.76	71.21
Solyc07g019440.2.1	Tomato	plastid	70.79	70.66
GSMUA_Achr4P02930_001	Banana	mitochondrion	61.51	69.58
GSMUA_Achr4P10620_001	Banana	mitochondrion, vacuole	61.9	69.26
GSMUA_Achr9P06920_001	Banana	cytosol	68.47	68.21
KRH15167	Soybean	mitochondrion, plastid	67.7	66.92
KRH05853	Soybean	plastid	67.5	66.6
GSMUA_Achr6P27190_001	Banana	cytosol, nucleus, plastid	67.31	66.41
CDY15884	Canola	cytosol, plastid	64.02	63.65
CDX99581	Canola	cytosol, plastid	64.22	63.24
CDX92546	Canola	plastid	62.86	62.98
CDY68209	Canola	plastid	62.67	62.79
CDY02573	Canola	plastid	62.67	62.79
Os05t0580000-01	Rice	plastid	62.67	62.43
HORVU1Hr1G091600.9	Barley	plastid	61.51	60.57
TraesCS1B01G449700.2	Wheat	plastid	61.7	60.42
CDY47206	Canola	plastid	62.86	60.07
Zm00001d039131_P007	Maize	plastid	62.86	58.24
Os01t0633100-01	Rice	plastid	57.45	57.34
OQU87201	Sorghum	plastid	56.29	56.29
CDY56761	Canola	endoplasmic reticulum	64.6	56.13
TraesCS1D01G427400.2	Wheat	plastid	58.03	55.45
TraesCS1A01G419600.2	Wheat	plastid	58.03	55.45
CDX72711	Canola	cytosol	64.22	52.53
CDY68655	Canola	plastid	49.71	50.29
CDX86314	Canola	plastid	49.9	50.29
CDY11773	Canola	endoplasmic reticulum, plastid, vacuole	12.77	48.53
CDY27884	Canola	plastid	48.55	48.27
CDY00843	Canola	plastid	48.55	48.27
OQU78492	Sorghum	plastid	61.9	47.13
Zm00001d044129_P001	Maize	cytosol, nucleus, plastid	54.74	43.01
CDY10130	Canola	plastid	35.01	37.55
CDY47264	Canola	plastid	34.43	36.93

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	GO:A0A078GQJ9
UniProt:A0A078GQJ9	InterPro:ADP-Glc_PPase	InterPro:ADP_Glu_pyroP_CS	EnsemblPlants:CDY27626	ProteinID:CDY27626	ProteinID:CDY27626.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0005978	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0008878	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009987	GO:GO:0016740	GO:GO:0016779	GO:GO:0019252	EnsemblPlantsGene:GSBRNA2T00038380001	InterPro:IPR029044
InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483	ScanProsite:PS00808	ScanProsite:PS00809	ScanProsite:PS00810
PANTHER:PTHR43523	PANTHER:PTHR43523:SF5	MetaCyc:PWY-622	SUPFAM:SSF51161	SUPFAM:SSF53448	TIGRFAMs:TIGR02091
InterPro:Trimer_LpxA-like_sf	UniPathway:UPA00164	UniParc:UPI0002542587	SEG:seg	:	:

Description

BnaA09g27810DGlucose-1-phosphate adenylyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A078GQJ9]

Coordinates

chrLK032207:+:392285..395682

Molecular Weight (calculated)

57041.4 Da

IEP (calculated)

6.987

GRAVY (calculated)

-0.163

Length

517 amino acids

Sequence
(BLAST)

001: MAAMMKLQCT SSSPFGLNRK VVSDSGRDSS FWGAEVVKAN HLKAQSGGPQ KIQTRLIRSV LTPSVDQESH EPLLRTPRAD PKNVASIILG GGAGTRLFPL
101: TSKRAKPAVP IGGCYRLIDI PMSNCINSGI RKIFILTQFN SFSLNRHLSR TYNFGNGVNF GDGFVEVLAA TQTSGDAGKK WFQGTADAVR QFIWVFEDAK
201: TKNVEHVLIL SGDHLYRMDY MNFVQKHIES NADITVSCLP MDESRASDYG LLKIDESGQI VQFSEKPKGD DLKAMQVDTT VLGLPPKEAA ELPYIASMGV
301: YVFRKEVLLN LLRSSYPTSN DFGSEIIPLA VKEHNVQAFL FNDYWEDIGT IGSFFDANLA LTEQPPKFQF YDPKTPFFTS PRFLPPTKVD KCRILDSIVS
401: HGCFLRECSV QHSIVGIRSR VESGVELQDT MMMGADFYQT EAEIASLLAE GKVPIGVGEN TKIRNCIIDK NAKIGKNVVI ANADGVEEGD RPEEGFYIRS
501: GITVVLKNAT IRDGLVL

Best Arabidopsis Sequence Match ( AT1G27680.1 )
(BLAST)

001: MESCFPAMKL NQCTFGLNNE IVSERVSAFW GTQVVKPNHL RTTKLRSAPQ KKIQTNLIRS VLTPFVDQES HEPLLRTQNA DPKNVASIIL GGGAGTRLFP
101: LTSKRAKPAV PIGGCYRLID IPMSNCINSG IRKIFILTQF NSFSLNRHLS RTYNFGNGVN FGDGFVEVLA ATQTSGDAGK KWFQGTADAV RQFIWVFEDA
201: KTKNVEHVLI LSGDHLYRMD YMNFVQKHIE SNADITVSCL PMDESRASDF GLLKIDQSGK IIQFSEKPKG DDLKAMQVDT SILGLPPKEA AESPYIASMG
301: VYVFRKEVLL KLLRSSYPTS NDFGSEIIPL AVGEHNVQAF LFNDYWEDIG TIGSFFDANL ALTEQPPKFQ FYDQKTPFFT SPRFLPPTKV DKCRILDSIV
401: SHGCFLRECS VQHSIVGIRS RLESGVELQD TMMMGADFYQ TEAEIASLLA EGKVPVGVGQ NTKIKNCIID KNAKIGKNVV IANADGVEEG DRPEEGFHIR
501: SGITVVLKNA TIRDGLHI

Arabidopsis Description

APL2Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55230]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.