CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47264	Canola	plastid	95.85	95.85
AT1G05610.2	Thale cress	plastid	86.1	86.1
VIT_05s0094g01500.t01	Wine grape	plastid	56.43	57.14
PGSC0003DMT400064936	Potato	cytosol	18.26	56.41
Solyc08g015670.2.1	Tomato	plastid	49.38	51.29
GSMUA_Achr3P21710_001	Banana	plastid	36.72	45.74
CDY68655	Canola	plastid	43.57	41.1
CDX86314	Canola	plastid	43.57	40.94
CDY27884	Canola	plastid	43.98	40.77
CDY00843	Canola	plastid	43.98	40.77
CDY02573	Canola	plastid	38.38	35.85
CDY68209	Canola	plastid	38.17	35.66
CDX92546	Canola	plastid	38.17	35.66
CDY41275	Canola	cytosol	23.65	35.4
CDX84911	Canola	plastid	37.14	35.1
CDY27626	Canola	plastid	37.55	35.01
CDY47206	Canola	plastid	38.38	34.2
CDY15884	Canola	cytosol, plastid	35.89	33.27
CDX99581	Canola	cytosol, plastid	35.48	32.57
CDY56761	Canola	endoplasmic reticulum	35.89	29.08
CDX72711	Canola	cytosol	35.89	27.37
CDY11773	Canola	endoplasmic reticulum, plastid, vacuole	6.85	24.26

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	GO:A0A078F6N6
UniProt:A0A078F6N6	InterPro:ADP_Glu_pyroP_CS	EnsemblPlants:CDY10130	ProteinID:CDY10130	ProteinID:CDY10130.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005975	GO:GO:0005978	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0008878	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0016779	EnsemblPlantsGene:GSBRNA2T00031939001
InterPro:IPR029044	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483	ScanProsite:PS00809	PANTHER:PTHR43523
PANTHER:PTHR43523:SF3	MetaCyc:PWY-622	SUPFAM:SSF51161	SUPFAM:SSF53448	InterPro:Trimer_LpxA-like_sf	UniPathway:UPA00164
UniParc:UPI0004EE74C2	SEG:seg	:	:	:	:

Description

BnaC05g03730DBnaC05g03730D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F6N6]

Coordinates

chrLK032001:-:167481..169686

Molecular Weight (calculated)

53999.7 Da

IEP (calculated)

7.725

GRAVY (calculated)

-0.264

Length

482 amino acids

Sequence
(BLAST)

001: MQIYSSSYSS YSTKLTNLHM IRSSSNHNQE RNNYNLKQIF VPNSCPNLSV SNTQQLPLNQ SVAAIVFGGG PDSELYPLTK TRSKGAIPIA ANYRLIDSVI
101: SNCINSDITK IYAITQFNST SLNSHLTKAY SGFGLGKDRF VEVIAAYQSL EDQGWFQGSA DAIRRCLWVF EEFPVTEFLV LPGHHLYRMD YNTLIEDHRR
201: SKADITIVGL SSATDHDSGF GLMEVDSTNL VTKFTINPKK TQQDLISVES RTRSDGTSSC YVPSTGIYVI GREQMVKLLR ECLVKAKDMA SEIIPGAISH
301: GMKVKAHMFD GYWEDVKSVG AYYRANMESI KRFYDKQCPL YTMPRCLPPS SMGEAVITDS IIGDGCILDR CVIRGSVVGM RTRIANEVII EDSIIVGSNI
401: YEMEEDVRRK GNEKKKEIRI GIGEKSRIRK AIVDKNARIG QNVMIINRDN VEESNRESEG YVIREGIIVI LRNAVIPDDS II

Best Arabidopsis Sequence Match ( AT1G05610.1 )
(BLAST)

001: MQISSSSFIT KFTNLHMVRS TSDHHQWRHN YNLKQLFIPN LSVSNSQHLP LNQSVAAIVF GGGSDSELYP LTKTRSKGAI PIAANYRLID AVISNCINSG
101: ITKIYAITQF NSTSLNSHLS KAYSGFGLGK DRFVEVIAAY QSLEDQGWFQ GTADAIRRCL WVFEEFPVTE FLVLPGHHLY KMDYKMLIED HRRSRADITI
201: VGLSSVTDHD FGFGFMEVDS TNAVTRFTIK GQQDLISVAN RTATRSDGTS SCSVPSAGIY VIGREQMVKL LRECLIKSKD LASEIIPGAI SEGMKVKAHM
301: FDGYWEDVRS IGAYYRANME SIKSYRFYDR QCPLYTMPRC LPPSSMSVAV ITNSIIGDGC ILDKCVIRGS VVGMRTRIAD EVIVEDSIIV GSDIYEMEED
401: VRRKGKEKKI EIRIGIGEKS RIRRAIVDKN ARIGKNVMII NRDNVEEGNR EAQGYVIREG IIIILRNAVI PNDSIL

Arabidopsis Description

APS2ADP-glucose pyrophosphorylase small subunit 2 [Source:TAIR;Acc:AT1G05610]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.