Factsheet for GSMUA_Achr3P21710_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400064936	Potato	cytosol	22.22	55.13
VIT_05s0094g01500.t01	Wine grape	plastid	51.68	42.02
Solyc08g015670.2.1	Tomato	plastid	47.8	39.87
AT1G05610.2	Thale cress	plastid	47.55	38.17
CDY47264	Canola	plastid	46.51	37.34
Bra015444.1-P	Field mustard	plastid	46.25	37.14
CDY10130	Canola	plastid	45.74	36.72
GSMUA_Achr1P09400_001	Banana	plastid	43.15	31.81
GSMUA_Achr4P10620_001	Banana	mitochondrion, vacuole	35.66	29.87
GSMUA_Achr4P02930_001	Banana	mitochondrion	34.88	29.54
GSMUA_Achr9P06920_001	Banana	cytosol	35.4	26.4
GSMUA_Achr1P11820_001	Banana	plastid	35.92	25.6
GSMUA_Achr6P27190_001	Banana	cytosol, nucleus, plastid	34.63	25.57

Protein Annotations

Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016779	EnsemblPlantsGene:GSMUA_Achr3G21710_001	EnsemblPlants:GSMUA_Achr3P21710_001
EnsemblPlants:GSMUA_Achr3T21710_001	InterPro:Hexapep	InterPro:IPR029044	UniProt:M0SGN7	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans
PFAM:PF00132	PFAM:PF00483	PANTHER:PTHR43523	PANTHER:PTHR43523:SF3	SUPFAM:SSF51161	SUPFAM:SSF53448
InterPro:Trimer_LpxA-like_sf	UniParc:UPI000294EE38	SEG:seg	:	:	:

Description

Putative Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr3G21710_001]

Coordinates

chr3:-:22665218..22667405

Molecular Weight (calculated)

43283.7 Da

IEP (calculated)

6.799

GRAVY (calculated)

-0.187

Length

387 amino acids

Sequence
(BLAST)

001: MYALTQFNST SLNSHISRAY SDVKLGKDGF VEVLTTYQSA EDLSWFKGNA DAVRRWLWLL EEHQVKDFLV LPGHHLYEMD YRKLIKAHRD NRADITIAMA
101: NNDRNYDASH DFLLHTSKNQ FHGLMLAPAS VHSPSAAVTT TTKYPVSNAE NMGIYVIRRD ILIELLQEQL PKANDFGTEV LQGAIALGMK VHAYMFDGHW
201: NDLRNIEAFY QVNIESITRS MSTNFHGRHP AIYTLPNYLP PTTISNALIK DSIIGDGCLL NRCKISNSVI GTRTYVGDDA VIKKSVVMGS DIYENLFHII
301: PSFSIAEQAD VSWNTTKMQR SEIPVGIGEK AHVQNAIIDK NARIGKNVKI VNKDGVQECD REASGYIISG GIVVVLKNAV IPDDSIL

Best Arabidopsis Sequence Match ( AT1G05610.2 )
(BLAST)

001: MQISSSSFIT KFTNLHMVRS TSDHHQWRHN YNLKQLFIPN LSVSNSQHLP LNQSVAAIVF GGGSDSELYP LTKTRSKGAI PIAANYRLID AVISNCINSG
101: ITKIYAITQF NSTSLNSHLS KAYSGFGLGK DRFVEVIAAY QSLEDQGWFQ GTADAIRRCL WVFEEFPVTE FLVLPGHHLY KMDYKMLIED HRRSRADITI
201: VGLSSVTDHD FGFGFMEVDS TNAVTRFTIK GQQDLISVAN RTATRSDGTS SCSVPSAGIY VIGREQMVKL LRECLIKSKD LASEIIPGAI SEGMKVKAHM
301: FDGYWEDVRS IGAYYRANME SIKRCRLDLN YRFYDRQCPL YTMPRCLPPS SMSVAVITNS IIGDGCILDK CVIRGSVVGM RTRIADEVIV EDSIIVGSDI
401: YEMEEDVRRK GKEKKIEIRI GIGEKSRIRR AIVDKNARIG KNVMIINRDN VEEGNREAQG YVIREGIIII LRNAVIPNDS IL

Arabidopsis Description

APS2ADP-glucose pyrophosphorylase small subunit 2 [Source:TAIR;Acc:AT1G05610]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.