CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015444.1-P	Field mustard	plastid	99.79	99.79
CDY10130	Canola	plastid	95.85	95.85
AT1G05610.2	Thale cress	plastid	86.31	86.31
VIT_05s0094g01500.t01	Wine grape	plastid	56.02	56.72
PGSC0003DMT400064936	Potato	cytosol	18.05	55.77
Solyc08g015670.2.1	Tomato	plastid	48.96	50.86
GSMUA_Achr3P21710_001	Banana	plastid	37.34	46.51
CDY68655	Canola	plastid	43.36	40.9
CDX86314	Canola	plastid	43.36	40.74
CDY00843	Canola	plastid	43.78	40.58
CDY27884	Canola	plastid	43.78	40.58
CDY02573	Canola	plastid	37.55	35.08
CDX92546	Canola	plastid	37.34	34.88
CDY68209	Canola	plastid	37.34	34.88
CDY41275	Canola	cytosol	23.24	34.78
CDX84911	Canola	plastid	36.72	34.71
CDY27626	Canola	plastid	36.93	34.43
CDY47206	Canola	plastid	37.55	33.46
CDY15884	Canola	cytosol, plastid	35.48	32.88
CDX99581	Canola	cytosol, plastid	35.06	32.19
CDY56761	Canola	endoplasmic reticulum	35.68	28.91
CDX72711	Canola	cytosol	35.68	27.22
CDY11773	Canola	endoplasmic reticulum, plastid, vacuole	6.64	23.53

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	GO:A0A078ID37
UniProt:A0A078ID37	InterPro:ADP_Glu_pyroP_CS	EnsemblPlants:CDY47264	ProteinID:CDY47264	ProteinID:CDY47264.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005975	GO:GO:0005978	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0008878	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0016779	EnsemblPlantsGene:GSBRNA2T00087069001
InterPro:IPR029044	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483	ScanProsite:PS00809	PANTHER:PTHR43523
PANTHER:PTHR43523:SF3	MetaCyc:PWY-622	SUPFAM:SSF51161	SUPFAM:SSF53448	InterPro:Trimer_LpxA-like_sf	UniPathway:UPA00164
UniParc:UPI0004EEB8F7	:	:	:	:	:

Description

BnaA10g03820DBnaA10g03820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ID37]

Coordinates

chrLK032705:+:19246..21427

Molecular Weight (calculated)

53818.5 Da

IEP (calculated)

7.738

GRAVY (calculated)

-0.230

Length

482 amino acids

Sequence
(BLAST)

001: MQIYSSSYSP YSTKITNLHM IRSSSNHNQE RHNYNLKQIF VPNSCPNLSV SNTQQLPLNQ SVAAIVFGGG PDSELYPLTK TRSKGAIPIA ANYRLIDSVI
101: SNCINSDITK IYAITQFNST SLNSHLTKAY SGFGLGKDRF VEVIAAYQSL EDQGWFQGSA DAIRRCLWVF EEFPVTEFLV LPGHHLYRMD YNTLIEDHRR
201: SKADITIVGL SSATDHDSGF GLMEVDSTNL VTKFTISPLK GQQDSISVES RTRSDGTSSC YVPSTGIYVI GREQMVKLLR ECLVQAKDMA SEIIPGAISH
301: GMKVKAHMFD GYWEDVKSVG AYYRANMESI KRFYDKQCPL YTMPRCLPPS SMGEAVITDS IIGDGCILNK CVIRGSVVGM RTRIADDVLI EDSIIVGSNI
401: YEMEVDARRK GKEKKTEIRI GIGEKSRIRR AIVDKNARIG QNVMIINRDN VEESNREAEG YVIREGIIVI LRNAVIPNDS II

Best Arabidopsis Sequence Match ( AT1G05610.1 )
(BLAST)

001: MQISSSSFIT KFTNLHMVRS TSDHHQWRHN YNLKQLFIPN LSVSNSQHLP LNQSVAAIVF GGGSDSELYP LTKTRSKGAI PIAANYRLID AVISNCINSG
101: ITKIYAITQF NSTSLNSHLS KAYSGFGLGK DRFVEVIAAY QSLEDQGWFQ GTADAIRRCL WVFEEFPVTE FLVLPGHHLY KMDYKMLIED HRRSRADITI
201: VGLSSVTDHD FGFGFMEVDS TNAVTRFTIK GQQDLISVAN RTATRSDGTS SCSVPSAGIY VIGREQMVKL LRECLIKSKD LASEIIPGAI SEGMKVKAHM
301: FDGYWEDVRS IGAYYRANME SIKSYRFYDR QCPLYTMPRC LPPSSMSVAV ITNSIIGDGC ILDKCVIRGS VVGMRTRIAD EVIVEDSIIV GSDIYEMEED
401: VRRKGKEKKI EIRIGIGEKS RIRRAIVDKN ARIGKNVMII NRDNVEEGNR EAQGYVIREG IIIILRNAVI PNDSIL

Arabidopsis Description

APS2ADP-glucose pyrophosphorylase small subunit 2 [Source:TAIR;Acc:AT1G05610]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.