Factsheet for Solyc08g015670.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400064936	Potato	cytosol	32.76	97.44
VIT_05s0094g01500.t01	Wine grape	plastid	58.84	57.35
AT1G05610.2	Thale cress	plastid	52.16	50.21
CDY10130	Canola	plastid	51.29	49.38
CDY47264	Canola	plastid	50.86	48.96
Bra015444.1-P	Field mustard	plastid	50.65	48.76
GSMUA_Achr3P21710_001	Banana	plastid	39.87	47.8
Solyc12g011120.1.1	Tomato	plastid	43.75	45.93
Solyc07g056140.2.1	Tomato	plastid	45.04	40.12
Solyc01g079790.2.1	Tomato	nucleus, plastid	37.72	33.98
Solyc01g109790.2.1	Tomato	extracellular	37.72	33.4
Solyc07g019440.2.1	Tomato	plastid	36.21	32.43

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	InterPro:ADP_Glu_pyroP_CS
GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0005978	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0008878	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0016779
InterPro:IPR029044	UniProt:K4CJ97	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483	ScanProsite:PS00809
PANTHER:PTHR43523	PANTHER:PTHR43523:SF3	SUPFAM:SSF51161	SUPFAM:SSF53448	EnsemblPlantsGene:Solyc08g015670.2	EnsemblPlants:Solyc08g015670.2.1
InterPro:Trimer_LpxA-like_sf	UniParc:UPI000276B4A7	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr8:+:5216507..5219973

Molecular Weight (calculated)

51876.3 Da

IEP (calculated)

7.820

GRAVY (calculated)

-0.252

Length

464 amino acids

Sequence
(BLAST)

001: MSLPTWLNLK IKSPHEYRYK PTSRLIPSSI PSKLNLPYTN HSECPNILCP PIDQNVAAIV FGDGSNSKLY PLTKRRSEAA LPIAGNYRLI DAVISNCINS
101: NIKKIYALTQ FNSASLNSHL SRAYSSAHIR NEPLVDVIAA YQSPEGKGWF QGTADAIRRC LWILEEYPIV DFLVLPGYHL YKMDFQELLK VHSNNKADIT
201: VAVLSRRTDK DVELGTFQVN SGNQVISFKD NPEVQNSDIS HDKYAGMDIY VVNKDAMIKL LTEYHPMAND FRREVVPGAI SLGMNVYAHK FSGYWEDMRT
301: IEAYYQANME SIKNTKYTYS LYDKESPLYT LPRHLPPTQI TDAAITDSVI GDGCFLNRCK IRGTVVGMKT RVGDGAIIED SVIMGSDTYQ SGRVEEDIHI
401: PIGIGEGSQI KKAIIDKNVR IGKNVKILNK ENVQECNNEA NGYIITKGIV VIMKGAIIPD GSIL

Best Arabidopsis Sequence Match ( AT1G05610.1 )
(BLAST)

001: MQISSSSFIT KFTNLHMVRS TSDHHQWRHN YNLKQLFIPN LSVSNSQHLP LNQSVAAIVF GGGSDSELYP LTKTRSKGAI PIAANYRLID AVISNCINSG
101: ITKIYAITQF NSTSLNSHLS KAYSGFGLGK DRFVEVIAAY QSLEDQGWFQ GTADAIRRCL WVFEEFPVTE FLVLPGHHLY KMDYKMLIED HRRSRADITI
201: VGLSSVTDHD FGFGFMEVDS TNAVTRFTIK GQQDLISVAN RTATRSDGTS SCSVPSAGIY VIGREQMVKL LRECLIKSKD LASEIIPGAI SEGMKVKAHM
301: FDGYWEDVRS IGAYYRANME SIKSYRFYDR QCPLYTMPRC LPPSSMSVAV ITNSIIGDGC ILDKCVIRGS VVGMRTRIAD EVIVEDSIIV GSDIYEMEED
401: VRRKGKEKKI EIRIGIGEKS RIRRAIVDKN ARIGKNVMII NRDNVEEGNR EAQGYVIREG IIIILRNAVI PNDSIL

Arabidopsis Description

APS2ADP-glucose pyrophosphorylase small subunit 2 [Source:TAIR;Acc:AT1G05610]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.