Factsheet for Bra015444.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47264	Canola	plastid	99.79	99.79
AT1G05610.2	Thale cress	plastid	86.1	86.1
VIT_05s0094g01500.t01	Wine grape	plastid	55.81	56.51
PGSC0003DMT400064936	Potato	cytosol	17.84	55.13
Solyc08g015670.2.1	Tomato	plastid	48.76	50.65
GSMUA_Achr3P21710_001	Banana	plastid	37.14	46.25
Bra037495.1-P	Field mustard	plastid	43.36	40.82
Bra015135.1-P	Field mustard	plastid	43.78	40.58
Bra023713.1-P	Field mustard	plastid	37.34	34.88
Bra002221.1-P	Field mustard	plastid	37.14	34.69
Bra032842.1-P	Field mustard	plastid	36.72	34.24
Bra033604.1-P	Field mustard	cytosol, plastid	35.68	32.89
Bra030291.1-P	Field mustard	cytosol, plastid	35.27	32.69

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	InterPro:ADP_Glu_pyroP_CS
EnsemblPlantsGene:Bra015444	EnsemblPlants:Bra015444.1	EnsemblPlants:Bra015444.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975
GO:GO:0005978	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0008878	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	GO:GO:0016779	InterPro:IPR029044	UniProt:M4DG21	InterPro:NTP_transferase_dom
InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483	ScanProsite:PS00809	PANTHER:PTHR43523	PANTHER:PTHR43523:SF3	SUPFAM:SSF51161
SUPFAM:SSF53448	InterPro:Trimer_LpxA-like_sf	UniParc:UPI0002543716	:	:	:

Description

AT1G05610 (E=1e-235) APS2 | APS2 (ADP-glucose pyrophoshorylase small subunit 2); glucose-1-phosphate adenylyltransferase/ nucleotidyltransferase/ transferase

Coordinates

chrA10:+:1726875..1729057

Molecular Weight (calculated)

53760.4 Da

IEP (calculated)

7.952

GRAVY (calculated)

-0.219

Length

482 amino acids

Sequence
(BLAST)

001: MQIYSSSYSP YSTKITNLHM IRSSSNHNQE RHNYNLKQIF VPNSCPNLSV SNTQQLPLNQ SVAAIVFGGG PDSELYPLTK TRSKGAIPIA ANYRLIDSVI
101: SNCINSDITK IYAITQFNST SLNSHLTKAY SGFGLGKDRF VEVIAAYQSL EDQGWFQGSA DAIRRCLWVF EEFPVTEFLV LPGHHLYRMD YNTLIEDHRR
201: SKADITIVGL SSATDHDSGF GLMEVDSTNL VTKFTISPLK GQQDSISVES RTRSDGTSSC YVPSTGIYVI GREQMVKLLR ECLVQAKDMA SEIIPGAISH
301: GMKVKAHMFD GYWEDVKSVG AYYRANMESI KRFYDKQCPL YTMPRCLPPS SMGEAVITDS IIGDGCILNK CVIRGSVVGM RTRIADDVLI EDSIIVGSNI
401: YEMEVDARRK GKEKKTEIRI GIGAKSRIRR AIVDKNARIG QNVMIINRDN VEESNREAEG YVIREGIIVI LRNAVIPNDS II

Best Arabidopsis Sequence Match ( AT1G05610.1 )
(BLAST)

001: MQISSSSFIT KFTNLHMVRS TSDHHQWRHN YNLKQLFIPN LSVSNSQHLP LNQSVAAIVF GGGSDSELYP LTKTRSKGAI PIAANYRLID AVISNCINSG
101: ITKIYAITQF NSTSLNSHLS KAYSGFGLGK DRFVEVIAAY QSLEDQGWFQ GTADAIRRCL WVFEEFPVTE FLVLPGHHLY KMDYKMLIED HRRSRADITI
201: VGLSSVTDHD FGFGFMEVDS TNAVTRFTIK GQQDLISVAN RTATRSDGTS SCSVPSAGIY VIGREQMVKL LRECLIKSKD LASEIIPGAI SEGMKVKAHM
301: FDGYWEDVRS IGAYYRANME SIKSYRFYDR QCPLYTMPRC LPPSSMSVAV ITNSIIGDGC ILDKCVIRGS VVGMRTRIAD EVIVEDSIIV GSDIYEMEED
401: VRRKGKEKKI EIRIGIGEKS RIRRAIVDKN ARIGKNVMII NRDNVEEGNR EAQGYVIREG IIIILRNAVI PNDSIL

Arabidopsis Description

APS2ADP-glucose pyrophosphorylase small subunit 2 [Source:TAIR;Acc:AT1G05610]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.