Factsheet for Bra033604.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 5
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G39210.1	Thale cress	plastid	90.63	90.98
CDY56761	Canola	endoplasmic reticulum	98.66	86.72
Bra030291.1-P	Field mustard	cytosol, plastid	83.17	83.65
KRH60824	Soybean	plastid	72.28	72.83
KRH51516	Soybean	plastid	72.28	72.83
KRH24456	Soybean	plastid	72.66	71.97
VIT_03s0038g04570.t01	Wine grape	cytosol	71.89	71.35
KRH29435	Soybean	cytosol	72.28	71.32
Solyc01g109790.2.1	Tomato	extracellular	70.75	70.61
PGSC0003DMT400001935	Potato	plastid	67.5	70.6
GSMUA_Achr4P02930_001	Banana	mitochondrion	59.27	67.83
GSMUA_Achr4P10620_001	Banana	mitochondrion, vacuole	58.89	66.67
Bra032842.1-P	Field mustard	plastid	63.86	64.6
GSMUA_Achr9P06920_001	Banana	cytosol	64.05	64.55
GSMUA_Achr6P27190_001	Banana	cytosol, nucleus, plastid	63.67	63.55
Os05t0580000-01	Rice	plastid	59.66	60.12
HORVU1Hr1G091600.9	Barley	plastid	60.23	60.0
TraesCS1B01G449700.2	Wheat	plastid	60.42	59.85
Bra023713.1-P	Field mustard	plastid	57.17	57.95
Bra002221.1-P	Field mustard	plastid	56.98	57.75
Os01t0633100-01	Rice	plastid	56.02	56.56
OQU87201	Sorghum	plastid	55.64	56.29
Zm00001d039131_P007	Maize	plastid	60.04	56.27
TraesCS1A01G419600.2	Wheat	plastid	56.79	54.9
TraesCS1D01G427400.2	Wheat	plastid	56.79	54.9
Bra037495.1-P	Field mustard	plastid	46.46	47.46
Bra015135.1-P	Field mustard	plastid	45.7	45.96
OQU78492	Sorghum	plastid	59.66	45.95
Zm00001d044129_P001	Maize	cytosol, nucleus, plastid	54.11	43.01
Bra015444.1-P	Field mustard	plastid	32.89	35.68

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	InterPro:ADP-Glc_PPase
InterPro:ADP_Glu_pyroP_CS	EnsemblPlantsGene:Bra033604	EnsemblPlants:Bra033604.1	EnsemblPlants:Bra033604.1-P	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005975	GO:GO:0005978	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0008878	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016740
GO:GO:0016779	GO:GO:0019252	InterPro:IPR029044	UniProt:M4EXR7	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans
PFAM:PF00483	ScanProsite:PS00808	ScanProsite:PS00809	ScanProsite:PS00810	PANTHER:PTHR43523	PANTHER:PTHR43523:SF4
SUPFAM:SSF51161	SUPFAM:SSF53448	TIGRFAMs:TIGR02091	InterPro:Trimer_LpxA-like_sf	UniParc:UPI000253F8E2	SEG:seg

Description

AT4G39210 (E=6e-274) APL3 | APL3; glucose-1-phosphate adenylyltransferase

Coordinates

chrA06:-:26036102..26038678

Molecular Weight (calculated)

58077.4 Da

IEP (calculated)

7.602

GRAVY (calculated)

-0.272

Length

523 amino acids

Sequence
(BLAST)

001: MDSCCYLGLG TNTVLPKDGY KNVENKFWGE KIKGNFSKSF ASDSSSKELR YRKSLNPGVA YAVATSKNAK EALRLQPSML GERRKADPKN VAAIILGGGN
101: GAKLFPLTKR AATPAVPVGG CYRMIDIPMS NCINSCINKI FVLTQFNSAS LNRHLARTYF GNGINFGDGF VEVLAATQTP GEAGKKWFQG TADAVRKFLW
201: VFEDAKNRNI ENIIILSGDH LYRMNYMDFV QYHVDSNADI TLSCAPVGES RASDYGLVNI DRTGRVVHFC EKPTGIDLKS MQSDTTMLGL SQQEAVKSPY
301: IASMGVYCFK TEALLKLLTR RYPSSNDFGS EIIPAAIRDH NVQGYVYRDY WEDIGTIKSF YDANLALVEE HPKFEFYDQD TPFYTSPRFL PPTKTEKCRI
401: LDSIISHGCF LGECSIQRSI IGERSRLDYG VELQDTLMLG ADSYQTESEI ASLLAEGNVP IGIGRDTKIR KCIIDKNAKI GKNVMILNSD DVQEADRPEE
501: GFYIRSGITV VVEKATIKDG TVI

Best Arabidopsis Sequence Match ( AT4G39210.1 )
(BLAST)

001: MDSCCNFSLG TKTVLAKDSF KNVENKFLGE KIKGSVLKPF SSDLSSKKFR NRKLRPGVAY AIATSKNAKE ALKNQPSMFE RRRADPKNVA AIILGGGDGA
101: KLFPLTKRAA TPAVPVGGCY RMIDIPMSNC INSCINKIFV LTQFNSASLN RHLARTYFGN GINFGDGFVE VLAATQTPGE AGKKWFQGTA DAVRKFLWVF
201: EDAKNRNIEN IIILSGDHLY RMNYMDFVQH HVDSKADITL SCAPVDESRA SEYGLVNIDR SGRVVHFSEK PTGIDLKSMQ TDTTMHGLSH QEAAKSPYIA
301: SMGVYCFKTE ALLKLLTWRY PSSNDFGSEI IPAAIKDHNV QGYIYRDYWE DIGTIKSFYE ANIALVEEHP KFEFYDQNTP FYTSPRFLPP TKTEKCRIVN
401: SVISHGCFLG ECSIQRSIIG ERSRLDYGVE LQDTLMLGAD SYQTESEIAS LLAEGNVPIG IGRDTKIRKC IIDKNAKIGK NVVIMNKDDV KEADRPEEGF
501: YIRSGITVVV EKATIKDGTV I

Arabidopsis Description

APL3Glucose-1-phosphate adenylyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178US50]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.