Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
26035336
plastid: 27992503 |
msms PMID:
26035336
doi
§Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan., †Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China., ‡National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan.
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU87201 | Sorghum | plastid | 77.03 | 77.18 |
| Os05t0580000-01 | Rice | plastid | 75.1 | 74.95 |
| CDY41275 | Canola | cytosol | 40.54 | 65.22 |
| GSMUA_Achr4P10620_001 | Banana | mitochondrion, vacuole | 57.34 | 64.29 |
| GSMUA_Achr4P02930_001 | Banana | mitochondrion | 55.6 | 63.02 |
| GSMUA_Achr9P06920_001 | Banana | cytosol | 61.2 | 61.08 |
| GSMUA_Achr6P27190_001 | Banana | cytosol, nucleus, plastid | 60.81 | 60.11 |
| Zm00001d044129_P001 | Maize | cytosol, nucleus, plastid | 75.68 | 59.57 |
| KRH51516 | Soybean | plastid | 58.69 | 58.57 |
| KRH29435 | Soybean | cytosol | 59.85 | 58.49 |
| VIT_18s0001g12840.t01 | Wine grape | plastid | 59.07 | 58.4 |
| KRH60824 | Soybean | plastid | 58.49 | 58.38 |
| KRH51829 | Soybean | plastid | 59.65 | 58.19 |
| KRH24456 | Soybean | plastid | 59.27 | 58.14 |
| KRH61137 | Soybean | plastid | 59.27 | 57.92 |
| CDX84911 | Canola | plastid | 56.95 | 57.84 |
| CDY27626 | Canola | plastid | 57.34 | 57.45 |
| Bra032842.1-P | Field mustard | plastid | 57.34 | 57.45 |
| Solyc01g109790.2.1 | Tomato | extracellular | 57.72 | 57.06 |
| VIT_03s0038g04570.t01 | Wine grape | cytosol | 57.92 | 56.93 |
| PGSC0003DMT400001935 | Potato | plastid | 54.83 | 56.8 |
| AT1G27680.1 | Thale cress | plastid | 56.56 | 56.56 |
| Bra033604.1-P | Field mustard | cytosol, plastid | 56.56 | 56.02 |
| PGSC0003DMT400041215 | Potato | plastid | 55.98 | 55.66 |
| Solyc07g019440.2.1 | Tomato | plastid | 55.6 | 55.6 |
| AT2G21590.4 | Thale cress | plastid | 55.41 | 54.88 |
| KRH15167 | Soybean | mitochondrion, plastid | 55.21 | 54.68 |
| CDY15884 | Canola | cytosol, plastid | 54.63 | 54.42 |
| AT4G39210.1 | Thale cress | plastid | 54.63 | 54.32 |
| Bra030291.1-P | Field mustard | cytosol, plastid | 54.44 | 54.23 |
| KRH05853 | Soybean | plastid | 54.63 | 54.01 |
| CDX99581 | Canola | cytosol, plastid | 54.44 | 53.71 |
| Os03t0735000-01 | Rice | plastid | 52.32 | 53.03 |
| Os07t0243200-01 | Rice | plastid | 51.35 | 52.26 |
| CDY56761 | Canola | endoplasmic reticulum | 56.56 | 49.24 |
| CDX72711 | Canola | cytosol | 56.37 | 46.2 |
| Os09t0298200-01 | Rice | plastid | 43.44 | 45.0 |
| Os08t0345800-02 | Rice | plastid | 42.28 | 42.61 |
| CDY11773 | Canola | endoplasmic reticulum, plastid, vacuole | 10.23 | 38.97 |
Protein Annotations
| KEGG:00500+2.7.7.27 | KEGG:00520+2.7.7.27 | Gene3D:2.160.10.10 | MapMan:3.2.2.3 | Gene3D:3.90.550.10 | EntrezGene:4326594 |
| ProteinID:AAF21886.1 | ProteinID:ACJ71331.1 | ProteinID:ACJ71339.1 | ProteinID:ACJ71346.1 | ProteinID:ACJ71348.1 | ProteinID:ACY56030.1 |
| ProteinID:ACY56031.1 | ProteinID:ACY56032.1 | ProteinID:ACY56033.1 | ProteinID:ACY56034.1 | ProteinID:ACY56035.1 | InterPro:ADP_Glu_pyroP_CS |
| EMBL:AK071497 | EMBL:AY028314 | ProteinID:BAD68891.1 | ProteinID:BAF05568.1 | ProteinID:BAS73313.1 | EMBL:EU267956 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005975 | GO:GO:0005978 |
| GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008878 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0010170 | GO:GO:0016740 | GO:GO:0016779 | GO:GO:0019252 | InterPro:IPR029044 | InterPro:NTP_transferase_dom |
| InterPro:Nucleotide-diphossugar_trans | EnsemblPlantsGene:Os01g0633100 | EnsemblPlants:Os01t0633100-01 | PFAM:PF00483 | ScanProsite:PS00809 | ScanProsite:PS00810 |
| PANTHER:PTHR43523 | PANTHER:PTHR43523:SF1 | UniProt:Q7G065 | SUPFAM:SSF51161 | SUPFAM:SSF53448 | InterPro:Trimer_LpxA-like_sf |
| UniParc:UPI00000A7CD0 | RefSeq:XP_015650361.1 | RefSeq:XP_015650370.1 | RefSeq:XP_015650378.1 | RefSeq:XP_015650387.1 | RefSeq:XP_015650395.1 |
| RefSeq:XP_015650403.1 | SEG:seg | : | : | : | : |
Description
ADP-GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT 2ADP-glucose pyrophosphorylase large subunit, Controll of starch biosynthesis in endosperm development (Os01t0633100-01)
Coordinates
chr1:+:25353805..25361883
Molecular Weight (calculated)
57577.9 Da
IEP (calculated)
5.491
GRAVY (calculated)
-0.221
Length
518 amino acids
Sequence
(BLAST)
(BLAST)
001: MQFMMPLDTN ACAQPMRRAG EGAGTERLME RLNIGGMTQE KALRKRCFGD GVTGTARCVF TSDADRDTPH LRTQSSRKNY ADASHVSAVI LGGGTGVQLF
101: PLTSTRATPA VPVGGCYRLI DIPMSNCFNS GINKIFVMTQ FNSASLNRHI HHTYLGGGIN FTDGSVQVLA ATQMPDEPAG WFQGTADAIR KFMWILEDHY
201: NQNNIEHVVI LCGDQLYRMN YMELVQKHVD DNADITISCA PIDGSRASDY GLVKFDDSGR VIQFLEKPEG ADLESMKVDT SFLSYAIDDK QKYPYIASMG
301: IYVLKKDVLL DILKSKYAHL QDFGSEILPR AVLEHNVKAC VFTEYWEDIG TIKSFFDANL ALTEQPPKFE FYDPKTPFFT SPRYLPPARL EKCKIKDAII
401: SDGCSFSECT IEHSVIGISS RVSIGCELKD TMMMGADQYE TEEETSKLLF EGKVPIGIGE NTKIRNCIID MNARIGRNVI IANTQGVQES DHPEEGYYIR
501: SGIVVILKNA TIKDGTVI
101: PLTSTRATPA VPVGGCYRLI DIPMSNCFNS GINKIFVMTQ FNSASLNRHI HHTYLGGGIN FTDGSVQVLA ATQMPDEPAG WFQGTADAIR KFMWILEDHY
201: NQNNIEHVVI LCGDQLYRMN YMELVQKHVD DNADITISCA PIDGSRASDY GLVKFDDSGR VIQFLEKPEG ADLESMKVDT SFLSYAIDDK QKYPYIASMG
301: IYVLKKDVLL DILKSKYAHL QDFGSEILPR AVLEHNVKAC VFTEYWEDIG TIKSFFDANL ALTEQPPKFE FYDPKTPFFT SPRYLPPARL EKCKIKDAII
401: SDGCSFSECT IEHSVIGISS RVSIGCELKD TMMMGADQYE TEEETSKLLF EGKVPIGIGE NTKIRNCIID MNARIGRNVI IANTQGVQES DHPEEGYYIR
501: SGIVVILKNA TIKDGTVI
001: MESCFPAMKL NQCTFGLNNE IVSERVSAFW GTQVVKPNHL RTTKLRSAPQ KKIQTNLIRS VLTPFVDQES HEPLLRTQNA DPKNVASIIL GGGAGTRLFP
101: LTSKRAKPAV PIGGCYRLID IPMSNCINSG IRKIFILTQF NSFSLNRHLS RTYNFGNGVN FGDGFVEVLA ATQTSGDAGK KWFQGTADAV RQFIWVFEDA
201: KTKNVEHVLI LSGDHLYRMD YMNFVQKHIE SNADITVSCL PMDESRASDF GLLKIDQSGK IIQFSEKPKG DDLKAMQVDT SILGLPPKEA AESPYIASMG
301: VYVFRKEVLL KLLRSSYPTS NDFGSEIIPL AVGEHNVQAF LFNDYWEDIG TIGSFFDANL ALTEQPPKFQ FYDQKTPFFT SPRFLPPTKV DKCRILDSIV
401: SHGCFLRECS VQHSIVGIRS RLESGVELQD TMMMGADFYQ TEAEIASLLA EGKVPVGVGQ NTKIKNCIID KNAKIGKNVV IANADGVEEG DRPEEGFHIR
501: SGITVVLKNA TIRDGLHI
101: LTSKRAKPAV PIGGCYRLID IPMSNCINSG IRKIFILTQF NSFSLNRHLS RTYNFGNGVN FGDGFVEVLA ATQTSGDAGK KWFQGTADAV RQFIWVFEDA
201: KTKNVEHVLI LSGDHLYRMD YMNFVQKHIE SNADITVSCL PMDESRASDF GLLKIDQSGK IIQFSEKPKG DDLKAMQVDT SILGLPPKEA AESPYIASMG
301: VYVFRKEVLL KLLRSSYPTS NDFGSEIIPL AVGEHNVQAF LFNDYWEDIG TIGSFFDANL ALTEQPPKFQ FYDQKTPFFT SPRFLPPTKV DKCRILDSIV
401: SHGCFLRECS VQHSIVGIRS RLESGVELQD TMMMGADFYQ TEAEIASLLA EGKVPVGVGQ NTKIKNCIID KNAKIGKNVV IANADGVEEG DRPEEGFHIR
501: SGITVVLKNA TIRDGLHI
Arabidopsis Description
APL2Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55230]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.