Factsheet for Os07t0243200-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plastid: 17406793

plasma membrane: 28056797

gfp PMID: 17406793 doi

SK Lee, SK Hwang, M Han, JS Eom, HG Kang, Y Han, SB Choi, MH Cho, SH Bhoo, G An, TR Hahn, TW Okita, JS Jeon

Graduate School of Biotechnology & Plant Metabolism Research Center, Kyung Hee University, Yongin 446-701, Korea.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU88760	Sorghum	plastid	82.91	82.26
Zm00001d019266_P002	Maize	plastid	79.37	78.14
VIT_07s0005g02800.t01	Wine grape	plastid	67.78	67.12
KRG96634	Soybean	plastid	65.23	62.76
KRH68365	Soybean	plastid	64.24	61.81
Os03t0735000-01	Rice	plastid	58.55	58.32
Os05t0580000-01	Rice	plastid	54.62	53.56
Os01t0633100-01	Rice	plastid	52.26	51.35
Os09t0298200-01	Rice	plastid	48.72	49.6
Os08t0345800-02	Rice	plastid	48.53	48.05

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	EntrezGene:4342819
InterPro:ADP-Glc_PPase	InterPro:ADP_Glu_pyroP_CS	EMBL:AK121036	ProteinID:BAC16096.1	ProteinID:BAD30207.1	ProteinID:BAF21190.1
ProteinID:BAT00789.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0005978
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0008878	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	GO:GO:0016779	GO:GO:0019252	InterPro:IPR029044
InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	EnsemblPlantsGene:Os07g0243200	EnsemblPlants:Os07t0243200-01	PFAM:PF00483	ScanProsite:PS00808
ScanProsite:PS00809	ScanProsite:PS00810	PANTHER:PTHR43523	PANTHER:PTHR43523:SF11	UniProt:Q0D7I3	SUPFAM:SSF51161
SUPFAM:SSF53448	TIGRFAMs:TIGR02091	InterPro:Trimer_LpxA-like_sf	UniParc:UPI0000E12A5C	RefSeq:XP_015645226.1	SEG:seg

Description

ADP-GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT 4Plastidic large subunit of ADP-glucose pyrophosphorylase (AGP), Starch synthesis in rice pollen (Os07t0243200-01)

Coordinates

chr7:-:7983125..7989283

Molecular Weight (calculated)

55832.1 Da

IEP (calculated)

7.838

GRAVY (calculated)

-0.107

Length

509 amino acids

Sequence
(BLAST)

001: MATCSWAATT AAAAPPRPPA RCRSRVAALR RTAAASAAAA SCVLAEAPKG LKVEQADAVE PAAAAAARRD VGPDTVASII LGGGAGTRLF PLTRTRAKPA
101: VPVGGCYRLI DIPMSNCINS KINKIYVLTQ FNSQSLNRHI ARTYNIGEGV GFGDGFVEVL AATQTTGESG KRWFQGTADA VRQFLWLFED ARLKRIENIL
201: ILSGDHLYRM DYMDFVQKHV DKGADISVAC VPVDESRASD FGLMKTDKNG RITDFLEKPK DESLKSMQLD MGTFGLRPEV ADTCKYMASM GIYVFRTDIL
301: LRLLRGHYPT ANDFGSEVIP MAAKDYNVQA YLFDGYWEDI GTIKSFFEAN LALTDQSPNF YFYDPVKPIF TSPRFLPPTK VENCKVLNSI VSHGCFLTEC
401: SVDRSVIGVR SRLEPGVQLK DTMMMGADYY QTEAERFSEL SDGKVPVGVG ENTIIRNCII DKNARIGKNV MIMNSQNVQE AERPLEGFYI RSGITVVLKN
501: AVIPDGTVI

Best Arabidopsis Sequence Match ( AT1G27680.1 )
(BLAST)

001: MESCFPAMKL NQCTFGLNNE IVSERVSAFW GTQVVKPNHL RTTKLRSAPQ KKIQTNLIRS VLTPFVDQES HEPLLRTQNA DPKNVASIIL GGGAGTRLFP
101: LTSKRAKPAV PIGGCYRLID IPMSNCINSG IRKIFILTQF NSFSLNRHLS RTYNFGNGVN FGDGFVEVLA ATQTSGDAGK KWFQGTADAV RQFIWVFEDA
201: KTKNVEHVLI LSGDHLYRMD YMNFVQKHIE SNADITVSCL PMDESRASDF GLLKIDQSGK IIQFSEKPKG DDLKAMQVDT SILGLPPKEA AESPYIASMG
301: VYVFRKEVLL KLLRSSYPTS NDFGSEIIPL AVGEHNVQAF LFNDYWEDIG TIGSFFDANL ALTEQPPKFQ FYDQKTPFFT SPRFLPPTKV DKCRILDSIV
401: SHGCFLRECS VQHSIVGIRS RLESGVELQD TMMMGADFYQ TEAEIASLLA EGKVPVGVGQ NTKIKNCIID KNAKIGKNVV IANADGVEEG DRPEEGFHIR
501: SGITVVLKNA TIRDGLHI

Arabidopsis Description

APL2Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55230]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.