CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68365	Soybean	plastid	96.22	96.22
VIT_07s0005g02800.t01	Wine grape	plastid	69.38	71.4
OQU88760	Sorghum	plastid	64.65	66.67
Os07t0243200-01	Rice	plastid	62.76	65.23
Zm00001d019266_P002	Maize	plastid	61.44	62.86
KRH51829	Soybean	plastid	62.57	62.34
KRH61137	Soybean	plastid	62.38	62.26
KRH24456	Soybean	plastid	61.63	61.74
KRH51516	Soybean	plastid	60.11	61.27
KRH60824	Soybean	plastid	60.11	61.27
KRH29435	Soybean	cytosol	60.3	60.19
KRH05853	Soybean	plastid	59.17	59.73
KRH15167	Soybean	mitochondrion, plastid	58.98	59.66
KRH51050	Soybean	nucleus, plastid	56.9	57.88
KRH02097	Soybean	nucleus, plastid	57.09	57.74
KRH14151	Soybean	cytosol	18.71	54.1
KRH73984	Soybean	nucleus, plastid	48.2	49.51
KRH14152	Soybean	plastid	28.73	47.35

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	EntrezGene:100786313	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10
EMBL:ACUP02012162	InterPro:ADP-Glc_PPase	InterPro:ADP_Glu_pyroP_CS	EnsemblPlantsGene:GLYMA_19G223100	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005975	GO:GO:0005978	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0008878	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016740
GO:GO:0016779	GO:GO:0019252	UniProt:I1NBK6	InterPro:IPR029044	EnsemblPlants:KRG96634	ProteinID:KRG96634
ProteinID:KRG96634.1	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483	ScanProsite:PS00808	ScanProsite:PS00809
ScanProsite:PS00810	PANTHER:PTHR43523	PANTHER:PTHR43523:SF11	MetaCyc:PWY-622	SUPFAM:SSF51161	SUPFAM:SSF53448
TIGRFAMs:TIGR02091	InterPro:Trimer_LpxA-like_sf	UniParc:UPI000296DF49	:	:	:

Description

hypothetical protein

Coordinates

chr19:-:47534500..47540180

Molecular Weight (calculated)

58504.7 Da

IEP (calculated)

8.513

GRAVY (calculated)

-0.053

Length

529 amino acids

Sequence
(BLAST)

001: MMVASELQGF FMSLGSKKTS FHRDRNLPSS FTGSRVNLLH SKSVASGFRL GKYFSVTQRN TTRRFLATST LADVANDFMA LQSPILTGRE ANPKTVASII
101: LGGGAGTRLF PLTQRRAKPA VPFGGCYRLV DIPMSNCINS GINKIYVLTQ FNSQSLNRHI ARTYNWGGCI NFGGGFVEVL AATQTPGESG KKWFQGTADA
201: VRQFLWLFED ADHKNIENIL ILCGDQLYRM DYMEIVQKHI NSCADISVSC LPVDGSRASD FGLVKVDERG QICQFLEKPK GELLRSMHVD TSIFGLSAQE
301: ARKFPYIASM GIYVFKIDVL LKVLRGCYPN ANDFGSEVIP MAAKDFNVQA CLFNGYWEDI GTIKSFFDAN LALMDQRPKF QLYDQSKPIF TCPRFLPPTK
401: MEKCEVINSL ISDGCFLKEC TVEHSIVGIR SRLDSGVQLK DTMIMGADYY QTEAEIASLL AAGNVPIGIG KNTKIVNCII DKNARIGNNV IIANKDNVQE
501: ADRPSEGFYI RSGITVVLKE SVISNGTII

Best Arabidopsis Sequence Match ( AT1G27680.1 )
(BLAST)

001: MESCFPAMKL NQCTFGLNNE IVSERVSAFW GTQVVKPNHL RTTKLRSAPQ KKIQTNLIRS VLTPFVDQES HEPLLRTQNA DPKNVASIIL GGGAGTRLFP
101: LTSKRAKPAV PIGGCYRLID IPMSNCINSG IRKIFILTQF NSFSLNRHLS RTYNFGNGVN FGDGFVEVLA ATQTSGDAGK KWFQGTADAV RQFIWVFEDA
201: KTKNVEHVLI LSGDHLYRMD YMNFVQKHIE SNADITVSCL PMDESRASDF GLLKIDQSGK IIQFSEKPKG DDLKAMQVDT SILGLPPKEA AESPYIASMG
301: VYVFRKEVLL KLLRSSYPTS NDFGSEIIPL AVGEHNVQAF LFNDYWEDIG TIGSFFDANL ALTEQPPKFQ FYDQKTPFFT SPRFLPPTKV DKCRILDSIV
401: SHGCFLRECS VQHSIVGIRS RLESGVELQD TMMMGADFYQ TEAEIASLLA EGKVPVGVGQ NTKIKNCIID KNAKIGKNVV IANADGVEEG DRPEEGFHIR
501: SGITVVLKNA TIRDGLHI

Arabidopsis Description

APL2Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55230]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.