CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60824	Soybean	plastid	97.5	97.5
KRH24456	Soybean	plastid	87.28	85.8
KRH29435	Soybean	cytosol	86.13	84.34
VIT_03s0038g04570.t01	Wine grape	cytosol	78.42	77.23
Solyc01g109790.2.1	Tomato	extracellular	74.18	73.47
PGSC0003DMT400001935	Potato	plastid	70.13	72.8
Bra033604.1-P	Field mustard	cytosol, plastid	72.83	72.28
AT4G39210.1	Thale cress	plastid	71.29	71.02
AT2G21590.4	Thale cress	plastid	71.29	70.75
Bra030291.1-P	Field mustard	cytosol, plastid	70.71	70.58
CDY15884	Canola	cytosol, plastid	70.52	70.38
GSMUA_Achr4P02930_001	Banana	mitochondrion	61.66	70.02
CDX99581	Canola	cytosol, plastid	70.52	69.71
GSMUA_Achr4P10620_001	Banana	mitochondrion, vacuole	62.04	69.7
KRH51829	Soybean	plastid	70.91	69.3
KRH61137	Soybean	plastid	69.94	68.49
GSMUA_Achr9P06920_001	Banana	cytosol	67.63	67.63
GSMUA_Achr6P27190_001	Banana	cytosol, nucleus, plastid	68.02	67.37
CDY56761	Canola	endoplasmic reticulum	73.03	63.7
KRH15167	Soybean	mitochondrion, plastid	63.78	63.29
Os05t0580000-01	Rice	plastid	62.81	62.81
HORVU1Hr1G091600.9	Barley	plastid	63.2	62.48
KRH05853	Soybean	plastid	62.81	62.21
TraesCS1B01G449700.2	Wheat	plastid	63.2	62.12
KRG96634	Soybean	plastid	61.27	60.11
KRH68365	Soybean	plastid	60.69	59.55
CDX72711	Canola	cytosol	72.06	59.18
Zm00001d039131_P007	Maize	plastid	63.2	58.78
Os01t0633100-01	Rice	plastid	58.57	58.69
KRH51050	Soybean	nucleus, plastid	58.0	57.88
KRH02097	Soybean	nucleus, plastid	58.19	57.74
TraesCS1D01G427400.2	Wheat	plastid	59.54	57.12
TraesCS1A01G419600.2	Wheat	plastid	59.34	56.93
OQU87201	Sorghum	plastid	56.65	56.87
KRH14151	Soybean	cytosol	18.11	51.37
KRH73984	Soybean	nucleus, plastid	48.36	48.74
OQU78492	Sorghum	plastid	63.01	48.16
KRH14152	Soybean	plastid	29.67	47.98
Zm00001d044129_P001	Maize	cytosol, nucleus, plastid	55.11	43.47

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	EntrezGene:100814910	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10
EMBL:ACUP02003379	InterPro:ADP-Glc_PPase	InterPro:ADP_Glu_pyroP_CS	EnsemblPlantsGene:GLYMA_06G011700	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005975	GO:GO:0005978	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0008878	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016740
GO:GO:0016779	GO:GO:0019252	UniProt:I1K764	InterPro:IPR029044	EnsemblPlants:KRH51516	ProteinID:KRH51516
ProteinID:KRH51516.1	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483	ScanProsite:PS00808	ScanProsite:PS00809
ScanProsite:PS00810	PANTHER:PTHR43523	PANTHER:PTHR43523:SF4	MetaCyc:PWY-622	SUPFAM:SSF51161	SUPFAM:SSF53448
TIGRFAMs:TIGR02091	InterPro:Trimer_LpxA-like_sf	UniParc:UPI0002339A55	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:873613..878088

Molecular Weight (calculated)

57005.1 Da

IEP (calculated)

6.844

GRAVY (calculated)

-0.140

Length

519 amino acids

Sequence
(BLAST)

001: MASACVTLKA NTHLANSEKG FLGERIKGGF NNSALVMNQL AIRSRSHKRV KHGVGVVSSV LTSNNAKESL TLQVPSFLRR RADPKNVVSI ILGGGPGTQL
101: FPLTKRAATP AVPVGGCYRL IDIPMSNCLN SGINKIFVLT QFNSASLNRH IARTYFGNGI NFGDGIVEVL AATQTPGEAG KNWFQGTADA VRQFTWVFED
201: AKNTNVENVL ILAGDHLYRM DYMDLVQSHV DRNADITVSC AAVGDSRASD YGLVKVDDRG RIIQFSEKPK GDDLKAMQAD TSLLGLSSQD ALESPYIASM
301: GVYVFKTDVL LNLLKWRYPT SNDFGSEIIP AAVRDHNVQS YFFGDYWEDI GTIKSFYNAN LALTEESHKF EFYDPKIPIY TSPGFLPPTK IDKCRIVDAI
401: ISHGCFLREC TVQHSIVGER SRLDYGVEVL DTVMMGADYY QTESEIASLL AEGKVPIGIG RNTKIRNCII DKNAKIGKDV IIANKDGVQE ADRPEDGFYI
501: RSGITIIMEK ATIEDGTVI

Best Arabidopsis Sequence Match ( AT4G39210.1 )
(BLAST)

001: MDSCCNFSLG TKTVLAKDSF KNVENKFLGE KIKGSVLKPF SSDLSSKKFR NRKLRPGVAY AIATSKNAKE ALKNQPSMFE RRRADPKNVA AIILGGGDGA
101: KLFPLTKRAA TPAVPVGGCY RMIDIPMSNC INSCINKIFV LTQFNSASLN RHLARTYFGN GINFGDGFVE VLAATQTPGE AGKKWFQGTA DAVRKFLWVF
201: EDAKNRNIEN IIILSGDHLY RMNYMDFVQH HVDSKADITL SCAPVDESRA SEYGLVNIDR SGRVVHFSEK PTGIDLKSMQ TDTTMHGLSH QEAAKSPYIA
301: SMGVYCFKTE ALLKLLTWRY PSSNDFGSEI IPAAIKDHNV QGYIYRDYWE DIGTIKSFYE ANIALVEEHP KFEFYDQNTP FYTSPRFLPP TKTEKCRIVN
401: SVISHGCFLG ECSIQRSIIG ERSRLDYGVE LQDTLMLGAD SYQTESEIAS LLAEGNVPIG IGRDTKIRKC IIDKNAKIGK NVVIMNKDDV KEADRPEEGF
501: YIRSGITVVV EKATIKDGTV I

Arabidopsis Description

APL3Glucose-1-phosphate adenylyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178US50]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.