Factsheet for TraesCS1A01G419600.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G427400.2	Wheat	plastid	98.71	98.71
HORVU1Hr1G091600.9	Barley	plastid	90.57	93.33
TraesCS1B01G449700.2	Wheat	plastid	90.94	93.18
Os05t0580000-01	Rice	plastid	82.81	86.32
Zm00001d039131_P007	Maize	plastid	81.52	79.03
OQU78492	Sorghum	plastid	82.81	65.98
CDY41275	Canola	cytosol	37.89	63.66
GSMUA_Achr4P02930_001	Banana	mitochondrion	53.42	63.24
GSMUA_Achr4P10620_001	Banana	mitochondrion, vacuole	53.97	63.2
GSMUA_Achr9P06920_001	Banana	cytosol	60.07	62.62
GSMUA_Achr6P27190_001	Banana	cytosol, nucleus, plastid	59.7	61.64
VIT_18s0001g12840.t01	Wine grape	plastid	58.23	60.11
KRH51516	Soybean	plastid	56.93	59.34
KRH60824	Soybean	plastid	56.93	59.34
KRH61137	Soybean	plastid	57.67	58.87
KRH24456	Soybean	plastid	57.12	58.52
KRH29435	Soybean	cytosol	57.12	58.3
VIT_03s0038g04570.t01	Wine grape	cytosol	56.75	58.25
CDY27626	Canola	plastid	55.45	58.03
Bra032842.1-P	Field mustard	plastid	55.45	58.03
Solyc01g109790.2.1	Tomato	extracellular	56.19	58.02
PGSC0003DMT400041215	Potato	plastid	55.82	57.97
KRH51829	Soybean	plastid	56.75	57.82
PGSC0003DMT400001935	Potato	plastid	53.42	57.8
CDX84911	Canola	plastid	54.34	57.65
Solyc07g019440.2.1	Tomato	plastid	54.9	57.34
AT1G27680.1	Thale cress	plastid	54.53	56.95
Bra033604.1-P	Field mustard	cytosol, plastid	54.9	56.79
AT4G39210.1	Thale cress	plastid	54.34	56.43
AT2G21590.4	Thale cress	plastid	53.6	55.45
CDY15884	Canola	cytosol, plastid	52.5	54.62
Bra030291.1-P	Field mustard	cytosol, plastid	52.5	54.62
KRH15167	Soybean	mitochondrion, plastid	52.5	54.3
CDX99581	Canola	cytosol, plastid	52.68	54.29
KRH05853	Soybean	plastid	52.5	54.2
TraesCS5A01G472000.1	Wheat	plastid	47.69	51.09
CDY56761	Canola	endoplasmic reticulum	54.9	49.92
CDX72711	Canola	cytosol	54.71	46.84
TraesCS7A01G287400.2	Wheat	golgi, plastid	38.82	41.02
CDY11773	Canola	endoplasmic reticulum, plastid, vacuole	9.8	38.97

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	InterPro:ADP-Glc_PPase
InterPro:ADP_Glu_pyroP_CS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0005978	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0008878	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
GO:GO:0016779	InterPro:IPR029044	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483	ScanProsite:PS00808
ScanProsite:PS00809	ScanProsite:PS00810	PANTHER:PTHR43523	PANTHER:PTHR43523:SF4	SUPFAM:SSF51161	SUPFAM:SSF53448
TIGRFAMs:TIGR02091	EnsemblPlantsGene:TraesCS1A01G419600	EnsemblPlants:TraesCS1A01G419600.2	InterPro:Trimer_LpxA-like_sf	TIGR:cd02508	TIGR:cd04651

Description

No Description!

Coordinates

chr1A:-:576371411..576374703

Molecular Weight (calculated)

59914.8 Da

IEP (calculated)

8.073

GRAVY (calculated)

-0.269

Length

541 amino acids

Sequence
(BLAST)

001: MSSMQFSSVL PLEGKACVSP VRREGSACER LKVGDSSSIR HERASRRMCN GGRGPAATGA QCVLTSDASP ADTLVLRTSF RRNYADPNEV AAVILGGGTG
101: TQLFPLTSTR ATPAVPIGGC YRLIDIPMSN CFNSGINKIF VMTQFNSASL NRHIHRTYLG GGINFTDGSV EVLAATQMPG EAAGWFRGTA DAVRKFIWVL
201: EDYYKNKSIE HILILSGDQL YRMDYMELVQ KHVDDNADIT LSCAPVGESR ASEYGLVKFD SSGRVVQFSE KPKGADLEAM KVDTSFLNFA IDDPAKYPYI
301: ASMGVYVFKR DVLLNLLKSR YAELHDFGSE ILPRALHDHN VQAYVFTDYW EDIGTIRSFF DANMALCEQP PKFEFYDPKT PFFTSPRYLP PTKSDKCRIK
401: EAIISHGCFL RECKIEHSII GVRSRLNSGS ELKNAMMMGA DSYETEDEIS RLMSEGKVPI GVGENTKISN CIIDMNARIG RDVVISNKEV RYPPSEFKLG
501: PKILKKTTLV SETMLLCAIS DRECKKPTGR RKGTTSGPGS W

Best Arabidopsis Sequence Match ( AT1G27680.1 )
(BLAST)

001: MESCFPAMKL NQCTFGLNNE IVSERVSAFW GTQVVKPNHL RTTKLRSAPQ KKIQTNLIRS VLTPFVDQES HEPLLRTQNA DPKNVASIIL GGGAGTRLFP
101: LTSKRAKPAV PIGGCYRLID IPMSNCINSG IRKIFILTQF NSFSLNRHLS RTYNFGNGVN FGDGFVEVLA ATQTSGDAGK KWFQGTADAV RQFIWVFEDA
201: KTKNVEHVLI LSGDHLYRMD YMNFVQKHIE SNADITVSCL PMDESRASDF GLLKIDQSGK IIQFSEKPKG DDLKAMQVDT SILGLPPKEA AESPYIASMG
301: VYVFRKEVLL KLLRSSYPTS NDFGSEIIPL AVGEHNVQAF LFNDYWEDIG TIGSFFDANL ALTEQPPKFQ FYDQKTPFFT SPRFLPPTKV DKCRILDSIV
401: SHGCFLRECS VQHSIVGIRS RLESGVELQD TMMMGADFYQ TEAEIASLLA EGKVPVGVGQ NTKIKNCIID KNAKIGKNVV IANADGVEEG DRPEEGFHIR
501: SGITVVLKNA TIRDGLHI

Arabidopsis Description

APL2Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55230]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.