Factsheet for GSMUA_Achr4P10620_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, vacuole

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 3
plastid 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P02930_001	Banana	mitochondrion	86.58	87.53
GSMUA_Achr9P06920_001	Banana	cytosol	79.44	70.71
GSMUA_Achr6P27190_001	Banana	cytosol, nucleus, plastid	79.22	69.85
CDY41275	Canola	cytosol	47.84	68.63
KRH61137	Soybean	plastid	73.38	63.96
VIT_18s0001g12840.t01	Wine grape	plastid	72.51	63.93
VIT_03s0038g04570.t01	Wine grape	cytosol	71.64	62.81
KRH51829	Soybean	plastid	72.08	62.71
CDX84911	Canola	plastid	69.05	62.55
KRH51516	Soybean	plastid	69.7	62.04
Bra032842.1-P	Field mustard	plastid	69.26	61.9
CDY27626	Canola	plastid	69.26	61.9
KRH60824	Soybean	plastid	69.26	61.66
KRH24456	Soybean	plastid	69.91	61.17
Os05t0580000-01	Rice	plastid	68.18	60.69
AT1G27680.1	Thale cress	plastid	67.97	60.62
PGSC0003DMT400041215	Potato	plastid	68.18	60.46
Solyc07g019440.2.1	Tomato	plastid	67.75	60.42
KRH29435	Soybean	cytosol	69.26	60.38
Solyc01g109790.2.1	Tomato	extracellular	68.18	60.11
HORVU1Hr1G091600.9	Barley	plastid	67.32	59.24
PGSC0003DMT400001935	Potato	plastid	63.85	59.0
AT4G39210.1	Thale cress	plastid	66.45	58.93
TraesCS1B01G449700.2	Wheat	plastid	67.32	58.9
Bra033604.1-P	Field mustard	cytosol, plastid	66.67	58.89
AT2G21590.4	Thale cress	plastid	66.23	58.51
CDX99581	Canola	cytosol, plastid	65.8	57.9
CDY15884	Canola	cytosol, plastid	65.15	57.88
Bra030291.1-P	Field mustard	cytosol, plastid	65.15	57.88
KRH05853	Soybean	plastid	65.58	57.82
KRH15167	Soybean	mitochondrion, plastid	65.37	57.74
Os01t0633100-01	Rice	plastid	64.29	57.34
Zm00001d039131_P007	Maize	plastid	67.97	56.27
OQU87201	Sorghum	plastid	62.55	55.9
TraesCS1A01G419600.2	Wheat	plastid	63.2	53.97
TraesCS1D01G427400.2	Wheat	plastid	63.2	53.97
GSMUA_Achr1P11820_001	Banana	plastid	62.12	52.85
CDY56761	Canola	endoplasmic reticulum	66.67	51.76
CDX72711	Canola	cytosol	66.02	48.26
OQU78492	Sorghum	plastid	68.18	46.39
GSMUA_Achr1P09400_001	Banana	plastid	50.87	44.76
Zm00001d044129_P001	Maize	cytosol, nucleus, plastid	61.9	43.47
CDY11773	Canola	endoplasmic reticulum, plastid, vacuole	12.77	43.38
GSMUA_Achr3P21710_001	Banana	plastid	29.87	35.66

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	InterPro:ADP-Glc_PPase
InterPro:ADP_Glu_pyroP_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0005978
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0008878	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	GO:GO:0016779	GO:GO:0019252	EnsemblPlantsGene:GSMUA_Achr4G10620_001
EnsemblPlants:GSMUA_Achr4P10620_001	EnsemblPlants:GSMUA_Achr4T10620_001	InterPro:IPR029044	UniProt:M0SMS9	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans
PFAM:PF00483	ScanProsite:PS00808	ScanProsite:PS00809	ScanProsite:PS00810	PANTHER:PTHR43523	PANTHER:PTHR43523:SF4
SUPFAM:SSF51161	SUPFAM:SSF53448	SignalP:SignalP-noTM	TIGRFAMs:TIGR02091	InterPro:Trimer_LpxA-like_sf	UniParc:UPI0002963359
SEG:seg	:	:	:	:	:

Description

Glucose-1-phosphate adenylyltransferase large subunit 1 (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr4G10620_001]

Coordinates

chr4:+:7712685..7716619

Molecular Weight (calculated)

51769.1 Da

IEP (calculated)

7.490

GRAVY (calculated)

-0.169

Length

462 amino acids

Sequence
(BLAST)

001: MLLYLYLFLN FPLQVIQAPR FGKHKPDARS VASIILGGGA GAQLFPLTST RATPAVPVGG CYRLIDIPMS NCINSGINKI FIMTQFNSAS LNRHIYRTFN
101: FGNGINFGDG FVEVLAATQS PGESGMNWFQ GTADAVRQFT WVFEDNRNKN IQYILILSGD QLYRMDYMDF KHVDTGADIT ISCVPVGASR ASDYGLIKID
201: KAGKIIQFSE KPKGGDLETM KDENTLFRLS HQDAKKYPYI ASMGVYVFNR NTLLELLRWT YPKANDFGSD ILPSAVKDYN VQAYIFKDYW EDIQTIKSFY
301: DANLALTDQP PKFQFYDPRT PIFTSPRFLP PNKIEQCRIR DAIISHGCFL HECSIEHSVV GMRSRVYYGA ELKHTLMMGA DDYETEAEIA SLLAEGKVPI
401: GVGENTKIRN CIIDMNARIG KNVVIANRDG VQEADRPSEG FYIRSGITTI LKSATVKDGT VI

Best Arabidopsis Sequence Match ( AT1G27680.1 )
(BLAST)

001: MESCFPAMKL NQCTFGLNNE IVSERVSAFW GTQVVKPNHL RTTKLRSAPQ KKIQTNLIRS VLTPFVDQES HEPLLRTQNA DPKNVASIIL GGGAGTRLFP
101: LTSKRAKPAV PIGGCYRLID IPMSNCINSG IRKIFILTQF NSFSLNRHLS RTYNFGNGVN FGDGFVEVLA ATQTSGDAGK KWFQGTADAV RQFIWVFEDA
201: KTKNVEHVLI LSGDHLYRMD YMNFVQKHIE SNADITVSCL PMDESRASDF GLLKIDQSGK IIQFSEKPKG DDLKAMQVDT SILGLPPKEA AESPYIASMG
301: VYVFRKEVLL KLLRSSYPTS NDFGSEIIPL AVGEHNVQAF LFNDYWEDIG TIGSFFDANL ALTEQPPKFQ FYDQKTPFFT SPRFLPPTKV DKCRILDSIV
401: SHGCFLRECS VQHSIVGIRS RLESGVELQD TMMMGADFYQ TEAEIASLLA EGKVPVGVGQ NTKIKNCIID KNAKIGKNVV IANADGVEEG DRPEEGFHIR
501: SGITVVLKNA TIRDGLHI

Arabidopsis Description

APL2Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55230]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.