CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030291.1-P	Field mustard	cytosol, plastid	98.85	98.85
CDX99581	Canola	cytosol, plastid	97.88	96.95
AT2G21590.4	Thale cress	plastid	90.19	89.67
CDY56761	Canola	endoplasmic reticulum	82.88	72.44
KRH60824	Soybean	plastid	70.38	70.52
KRH51516	Soybean	plastid	70.38	70.52
KRH24456	Soybean	plastid	71.54	70.45
KRH29435	Soybean	cytosol	71.54	70.19
Solyc01g109790.2.1	Tomato	extracellular	69.62	69.08
VIT_03s0038g04570.t01	Wine grape	cytosol	70.0	69.07
PGSC0003DMT400001935	Potato	plastid	65.77	68.4
CDY41275	Canola	cytosol	42.31	68.32
CDX72711	Canola	cytosol	82.88	68.2
GSMUA_Achr4P02930_001	Banana	mitochondrion	59.04	67.18
GSMUA_Achr4P10620_001	Banana	mitochondrion, vacuole	57.88	65.15
CDY27626	Canola	plastid	63.65	64.02
CDX84911	Canola	plastid	62.69	63.92
GSMUA_Achr9P06920_001	Banana	cytosol	63.08	63.2
GSMUA_Achr6P27190_001	Banana	cytosol, nucleus, plastid	61.92	61.45
Os05t0580000-01	Rice	plastid	57.88	58.0
CDX92546	Canola	plastid	57.5	57.95
CDY68209	Canola	plastid	57.31	57.75
HORVU1Hr1G091600.9	Barley	plastid	58.08	57.52
TraesCS1B01G449700.2	Wheat	plastid	58.27	57.39
CDY02573	Canola	plastid	56.73	57.17
OQU87201	Sorghum	plastid	55.0	55.32
Zm00001d039131_P007	Maize	plastid	59.04	55.02
Os01t0633100-01	Rice	plastid	54.42	54.63
CDY47206	Canola	plastid	56.54	54.34
TraesCS1A01G419600.2	Wheat	plastid	54.62	52.5
TraesCS1D01G427400.2	Wheat	plastid	54.62	52.5
CDY68655	Canola	plastid	46.73	47.55
CDX86314	Canola	plastid	46.73	47.37
CDY00843	Canola	plastid	47.31	47.31
CDY27884	Canola	plastid	47.31	47.31
OQU78492	Sorghum	plastid	58.65	44.92
Zm00001d044129_P001	Maize	cytosol, nucleus, plastid	53.46	42.25
CDY11773	Canola	endoplasmic reticulum, plastid, vacuole	9.81	37.5
CDY10130	Canola	plastid	33.27	35.89
CDY47264	Canola	plastid	32.88	35.48

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	GO:A0A078FSJ5
UniProt:A0A078FSJ5	InterPro:ADP-Glc_PPase	InterPro:ADP_Glu_pyroP_CS	EnsemblPlants:CDY15884	ProteinID:CDY15884	ProteinID:CDY15884.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0005978	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0008878	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009987	GO:GO:0016740	GO:GO:0016779	GO:GO:0019252	EnsemblPlantsGene:GSBRNA2T00090244001	InterPro:IPR029044
InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483	ScanProsite:PS00808	ScanProsite:PS00809	ScanProsite:PS00810
PANTHER:PTHR43523	PANTHER:PTHR43523:SF4	MetaCyc:PWY-622	SUPFAM:SSF51161	SUPFAM:SSF53448	TIGRFAMs:TIGR02091
InterPro:Trimer_LpxA-like_sf	UniPathway:UPA00164	UniParc:UPI0004EF377D	SEG:seg	:	:

Description

BnaA04g12270DGlucose-1-phosphate adenylyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A078FSJ5]

Coordinates

chrLK032059:-:280238..284016

Molecular Weight (calculated)

57823.1 Da

IEP (calculated)

7.421

GRAVY (calculated)

-0.256

Length

520 amino acids

Sequence
(BLAST)

001: MDSSHCFASG KSSSVLPKLT FKNVDNKFWG ENIKSNGFFK RLNSNQFGNR KFKHGGVVYA VATSKNPNEA MIVKPSMFEK RKADPKNVAA IILGGGNGAQ
101: LFPLTKRAAT PAVPVGGCYR LIDIPMSNCI NSCINKIFVL TQFNSASLNR HLARTYFGNG INFGGGFVEV LAATQTPGEA GKKWFQGTAD AVRKFLWVFE
201: DAKNRNIENI LILSGDHLYR MNYMDFVQSH VDSNADVTLS CAPVSESRAS NFGLVKIDRG GRVTHFFEKP TGVDLKSMQT DTTMLGLSHE EATDSPYIAS
301: MGVYCFKTEA LLDLLMQQYP TSNDFGSEVI PAAIRDQDVQ GYIFRDYWED IGTIKTFYEA NLALVEERPK FEFYDPDTPF YTSPRFLPPT KTEKCRMVDS
401: IISHGCFMRE CSVQRSIIGE RSRLDYGVEL QDTLMLGADY YQTESEIASL LAEGKVPIGI GQDSKIRKCI IDKNAKIGKN VIIMNKGDVQ EADRPEEGFY
501: IRSGITVVVE KATIQDGTVI

Best Arabidopsis Sequence Match ( AT2G21590.2 )
(BLAST)

001: MDSSYSFALG TSSSILPKLS FRNVENRFYG EKNNNNGLCK RFGSDLGSKK FRNQKFKHGV VYAVATSDNP KKAMTVKTSM FERRKVDPQN VAAIILGGGN
101: GAKLFPLTMR AATPAVPVGG CYRLIDIPMS NCINSCINKI FVLTQFNSAS LNRHLARTYF GNGINFGGGF VEVLAATQTP GEAGKKWFQG TADAVRKFLW
201: VFEDAKNRNI ENILILSGDH LYRMNYMDFV QSHVDSNADI TLSCAPVSES RASNFGLVKI DRGGRVIHFS EKPTGVDLKS MQTDTTMLGL SHQEATDSPY
301: IASMGVYCFK TEALLNLLTR QYPSSNDFGS EVIPAAIRDH DVQGYIFRDY WEDIGTIKTF YEANLALVEE RPKFEFYDPE TPFYTSPRFL PPTKAEKCRM
401: VDSIISHGCF LRECSVQRSI IGERSRLDYG VELQDTLMLG ADYYQTESEI ASLLAEGKVP IGIGKDTKIR KCIIDKNAKI GKNVIIMNKG DVQEADRPEE
501: GFYIRSGITV IVEKATIQDG TVI

Arabidopsis Description

APL4Probable glucose-1-phosphate adenylyltransferase large subunit, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SIK1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.