CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037495.1-P	Field mustard	plastid	99.03	99.22
CDY68655	Canola	plastid	97.08	97.46
KRH14151	Soybean	cytosol	33.14	92.9
AT5G48300.1	Thale cress	plastid	92.4	91.15
VIT_12s0057g01480.t01	Wine grape	plastid	87.13	87.82
Solyc12g011120.1.1	Tomato	plastid	75.24	87.33
KRH73984	Soybean	nucleus, plastid	86.94	86.6
CDY00843	Canola	plastid	86.94	85.77
CDY27884	Canola	plastid	86.94	85.77
Solyc07g056140.2.1	Tomato	plastid	86.94	85.6
PGSC0003DMT400079823	Potato	cytosol, extracellular, plastid	86.74	85.41
TraesCS7B01G183300.1	Wheat	plastid	83.63	83.46
TraesCS7D01G284900.1	Wheat	plastid	83.43	83.27
KRH14152	Soybean	plastid	52.05	83.18
TraesCS7A01G287400.2	Wheat	golgi, plastid	82.85	83.01
Os08t0345800-02	Rice	plastid	83.04	82.88
HORVU7Hr1G067620.2	Barley	plastid	83.04	82.88
GSMUA_Achr1P09400_001	Banana	plastid	83.63	81.71
Zm00001d032385_P001	Maize	plastid	81.87	81.24
KXG24924	Sorghum	plastid	81.87	81.24
Os09t0298200-01	Rice	plastid	79.14	81.2
PGSC0003DMT400097320	Potato	plastid	81.87	80.92
TraesCS5B01G175800.1	Wheat	plastid	78.56	80.44
Zm00001d005546_P002	Maize	plastid	79.92	80.39
TraesCS5D01G182600.1	Wheat	plastid	78.36	80.24
EER98661	Sorghum	plastid	79.53	80.0
Zm00001d050032_P003	Maize	plastid	80.9	78.9
Zm00001d023256_P001	Maize	cytosol	15.01	76.24
Zm00001d025723_P001	Maize	cytosol	45.03	54.35
CDY41275	Canola	cytosol	33.33	53.11
CDX84911	Canola	plastid	49.9	50.2
CDX92546	Canola	plastid	50.29	50.0
CDY27626	Canola	plastid	50.29	49.9
CDY68209	Canola	plastid	50.1	49.81
CDY02573	Canola	plastid	49.71	49.42
CDY47206	Canola	plastid	49.51	46.95
CDY15884	Canola	cytosol, plastid	47.37	46.73
CDX99581	Canola	cytosol, plastid	47.56	46.48
CDY10130	Canola	plastid	40.94	43.57
CDY47264	Canola	plastid	40.74	43.36
CDY56761	Canola	endoplasmic reticulum	47.37	40.84
CDX72711	Canola	cytosol	46.59	37.82
CDY11773	Canola	endoplasmic reticulum, plastid, vacuole	7.6	28.68

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	GO:A0A078DD97
InterPro:ADP-Glc_PPase	InterPro:ADP_Glu_pyroP_CS	EnsemblPlants:CDX86314	ProteinID:CDX86314	ProteinID:CDX86314.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005975	GO:GO:0005978	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0008878	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0016779	GO:GO:0019252
EnsemblPlantsGene:GSBRNA2T00144434001	InterPro:IPR029044	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483	ScanProsite:PS00808
ScanProsite:PS00809	ScanProsite:PS00810	PANTHER:PTHR43523	PANTHER:PTHR43523:SF9	MetaCyc:PWY-622	SUPFAM:SSF51161
SUPFAM:SSF53448	TIGRFAMs:TIGR02091	InterPro:Trimer_LpxA-like_sf	UniPathway:UPA00164	UniParc:UPI0004EE6F16	SEG:seg

Description

BnaA06g30310D

Coordinates

chrLK031845:-:905571..908291

Molecular Weight (calculated)

56127.4 Da

IEP (calculated)

7.203

GRAVY (calculated)

-0.150

Length

513 amino acids

Sequence
(BLAST)

001: MASIAATGVL KVPPPAAASC EAVPTRTLSF SSSSVSLRAT VSHRRGSLLS RNRLRNPMIV SPKAVSDSQN SQTCLDPDAS RSVLGIILGG GAGTRLYPLT
101: KKRAKPAVPL GANYRLIDIP VSNCLNSNIN KIYVLTQFNS ASLNRHLSRA YATNMGGYKN EGFVEVLAAQ QSPENPNWFQ GTADAVRQYL WLFEEHNVLE
201: YLILAGDHLY RMDYEKFIQA HRETDADITV AALPMDEERA TAFGLMKIDE EGRIVEFAEK PKGEQLKAMK VDTTILGLDD KRAKEMPYIA SMGIYVVSKD
301: VMLELLRNKF PGANDFGSEV IPGATSLGLR VQAYLYDGYW EDIGTIEAFY NANLGITKKP VPDFSFYDRS APIYTQPRYL PPSKMLDADV TDSVIGEGCV
401: IKNCKIHHSV VGLRSCISEG AIIEDSLLMG ADYYETASEK SLLTAKGSVP IGIGKNSHIK RAIIDKNARI GDNVKIINSD NVQEAARETE GYFIKSGIVT
501: VIKDALIPTG TLI

Best Arabidopsis Sequence Match ( AT5G48300.1 )
(BLAST)

001: MASVSAIGVL KVPPASTSNS TGKATEAVPT RTLSFSSSVT SSDDKISLKS TVSRLCKSVV RRNPIIVSPK AVSDSQNSQT CLDPDASSSV LGIILGGGAG
101: TRLYPLTKKR AKPAVPLGAN YRLIDIPVSN CLNSNISKIY VLTQFNSASL NRHLSRAYAS NMGGYKNEGF VEVLAAQQSP ENPNWFQGTA DAVRQYLWLF
201: EEHNVLEYLI LAGDHLYRMD YEKFIQAHRE TDADITVAAL PMDEQRATAF GLMKIDEEGR IIEFAEKPKG EHLKAMKVDT TILGLDDQRA KEMPFIASMG
301: IYVVSRDVML DLLRNQFPGA NDFGSEVIPG ATSLGLRVQA YLYDGYWEDI GTIEAFYNAN LGITKKPVPD FSFYDRSAPI YTQPRYLPPS KMLDADVTDS
401: VIGEGCVIKN CKIHHSVVGL RSCISEGAII EDSLLMGADY YETATEKSLL SAKGSVPIGI GKNSHIKRAI IDKNARIGDN VKIINSDNVQ EAARETDGYF
501: IKSGIVTVIK DALIPTGTVI

Arabidopsis Description

APS1Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55228]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.