Factsheet for TraesCS5D01G182600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G175800.1	Wheat	plastid	98.8	98.8
Os09t0298200-01	Rice	plastid	90.82	91.0
Zm00001d005546_P002	Maize	plastid	89.02	87.45
EER98661	Sorghum	plastid	88.82	87.25
KRH14151	Soybean	cytosol	31.14	85.25
Solyc12g011120.1.1	Tomato	plastid	73.25	83.03
TraesCS7D01G284900.1	Wheat	plastid	83.83	81.71
KRH73984	Soybean	nucleus, plastid	81.24	79.03
VIT_12s0057g01480.t01	Wine grape	plastid	80.04	78.78
CDY68655	Canola	plastid	80.04	78.47
CDX86314	Canola	plastid	80.24	78.36
Bra037495.1-P	Field mustard	plastid	79.84	78.12
CDY00843	Canola	plastid	80.64	77.69
CDY27884	Canola	plastid	80.44	77.5
Bra015135.1-P	Field mustard	plastid	80.44	77.5
AT5G48300.1	Thale cress	plastid	80.04	77.12
Solyc07g056140.2.1	Tomato	plastid	80.04	76.97
PGSC0003DMT400079823	Potato	cytosol, extracellular, plastid	79.44	76.39
KRH14152	Soybean	plastid	48.1	75.08
GSMUA_Achr1P09400_001	Banana	plastid	78.64	75.05
PGSC0003DMT400097320	Potato	plastid	76.65	73.99
TraesCS5D01G484500.2	Wheat	plastid	49.7	49.31
TraesCS1D01G427400.2	Wheat	plastid	42.12	39.0

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	InterPro:ADP-Glc_PPase
InterPro:ADP_Glu_pyroP_CS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0005978	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0008878	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
GO:GO:0016779	InterPro:IPR029044	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483	ScanProsite:PS00808
ScanProsite:PS00809	ScanProsite:PS00810	PANTHER:PTHR43523	PANTHER:PTHR43523:SF7	SUPFAM:SSF51161	SUPFAM:SSF53448
TIGRFAMs:TIGR02091	EnsemblPlantsGene:TraesCS5D01G182600	EnsemblPlants:TraesCS5D01G182600.1	InterPro:Trimer_LpxA-like_sf	TIGR:cd02508	TIGR:cd04651
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:283489953..283493724

Molecular Weight (calculated)

54668.2 Da

IEP (calculated)

5.522

GRAVY (calculated)

-0.154

Length

501 amino acids

Sequence
(BLAST)

001: MAMATAMGAT AATYGAPIPA PAPAAFSPHR AAGGRRVRAV TARPRPLFSP RAVSDSRNSQ TCLDPDASTS VLGIILGGGA GTRLYPLTKK RAKPAVPLGA
101: NYRLIDIPVS NCLNSNVSKI YVLTQFNSAS LNRHLSRAYG NNIGGYKNDG FVEVLAAQQS PENPDWFQGT ADAVRQYLWL FEEHNVMEFL ILAGDHLYRM
201: DYQKFIQAHR ETDADITVAA LPMDEERATA FGLMKIDDEG RIVEFSEKPK GEKLKAMMVD TTILGLDSER AKELPYIASM GIYVFSKDAM LRLLRDNFPS
301: ANDFGSEVIP GATEIGMRVQ AYLYDGYWED IGTIEAFYNA NLGITKKPVP DFSFYDRSAP IYTQSRYLPP SKVLNADVTD SVIGEGCVIN HCTINHSVVG
401: LRSCISEGAV IEDSLLMGAD YYETENDKQV LSESGGIPIG IGKNAHIRKA IIDKNARIGE NVKIINVDDI QEASRESDGY FIKSGIVTVI KDALIPSGTV
501: I

Best Arabidopsis Sequence Match ( AT1G27680.1 )
(BLAST)

001: MESCFPAMKL NQCTFGLNNE IVSERVSAFW GTQVVKPNHL RTTKLRSAPQ KKIQTNLIRS VLTPFVDQES HEPLLRTQNA DPKNVASIIL GGGAGTRLFP
101: LTSKRAKPAV PIGGCYRLID IPMSNCINSG IRKIFILTQF NSFSLNRHLS RTYNFGNGVN FGDGFVEVLA ATQTSGDAGK KWFQGTADAV RQFIWVFEDA
201: KTKNVEHVLI LSGDHLYRMD YMNFVQKHIE SNADITVSCL PMDESRASDF GLLKIDQSGK IIQFSEKPKG DDLKAMQVDT SILGLPPKEA AESPYIASMG
301: VYVFRKEVLL KLLRSSYPTS NDFGSEIIPL AVGEHNVQAF LFNDYWEDIG TIGSFFDANL ALTEQPPKFQ FYDQKTPFFT SPRFLPPTKV DKCRILDSIV
401: SHGCFLRECS VQHSIVGIRS RLESGVELQD TMMMGADFYQ TEAEIASLLA EGKVPVGVGQ NTKIKNCIID KNAKIGKNVV IANADGVEEG DRPEEGFHIR
501: SGITVVLKNA TIRDGLHI

Arabidopsis Description

APL2Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55230]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.