Factsheet for Bra037495.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86314	Canola	plastid	99.22	99.03
KRH14151	Soybean	cytosol	33.2	92.9
AT5G48300.1	Thale cress	plastid	92.38	90.96
VIT_12s0057g01480.t01	Wine grape	plastid	86.91	87.43
Solyc12g011120.1.1	Tomato	plastid	75.39	87.33
KRH73984	Soybean	nucleus, plastid	86.72	86.21
Bra015135.1-P	Field mustard	plastid	86.72	85.38
Solyc07g056140.2.1	Tomato	plastid	86.72	85.22
PGSC0003DMT400079823	Potato	cytosol, extracellular, plastid	86.52	85.03
TraesCS7B01G183300.1	Wheat	plastid	83.4	83.07
TraesCS7D01G284900.1	Wheat	plastid	83.2	82.88
TraesCS7A01G287400.2	Wheat	golgi, plastid	82.62	82.62
KRH14152	Soybean	plastid	51.76	82.55
HORVU7Hr1G067620.2	Barley	plastid	82.81	82.49
Os08t0345800-02	Rice	plastid	82.62	82.3
GSMUA_Achr1P09400_001	Banana	plastid	83.59	81.52
Os09t0298200-01	Rice	plastid	79.1	81.0
PGSC0003DMT400097320	Potato	plastid	82.03	80.92
KXG24924	Sorghum	plastid	81.64	80.85
Zm00001d032385_P001	Maize	plastid	81.64	80.85
Zm00001d005546_P002	Maize	plastid	79.88	80.2
TraesCS5B01G175800.1	Wheat	plastid	78.32	80.04
TraesCS5D01G182600.1	Wheat	plastid	78.12	79.84
EER98661	Sorghum	plastid	79.49	79.8
Zm00001d050032_P003	Maize	plastid	80.66	78.52
Zm00001d023256_P001	Maize	cytosol	15.04	76.24
Zm00001d025723_P001	Maize	cytosol	45.12	54.35
Bra002221.1-P	Field mustard	plastid	50.2	49.81
Bra032842.1-P	Field mustard	plastid	50.0	49.52
Bra023713.1-P	Field mustard	plastid	49.41	49.03
Bra030291.1-P	Field mustard	cytosol, plastid	47.46	46.73
Bra033604.1-P	Field mustard	cytosol, plastid	47.46	46.46
Bra015444.1-P	Field mustard	plastid	40.82	43.36

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	InterPro:ADP-Glc_PPase
InterPro:ADP_Glu_pyroP_CS	EnsemblPlantsGene:Bra037495	EnsemblPlants:Bra037495.1	EnsemblPlants:Bra037495.1-P	GO:GO:0000003	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005576
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0005978	GO:GO:0006091
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008878	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009628	GO:GO:0009791	GO:GO:0009987	GO:GO:0016740
GO:GO:0016779	GO:GO:0019252	GO:GO:0030931	GO:GO:0048046	GO:GO:0048573	InterPro:IPR029044
UniProt:M4F8T3	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483	ScanProsite:PS00808	ScanProsite:PS00809
ScanProsite:PS00810	PANTHER:PTHR43523	PANTHER:PTHR43523:SF9	SUPFAM:SSF51161	SUPFAM:SSF53448	TIGRFAMs:TIGR02091
InterPro:Trimer_LpxA-like_sf	UniParc:UPI000253F91A	:	:	:	:

Description

AT5G48300 (E=4e-268) ADG1, APS1 | ADG1 (ADP GLUCOSE PYROPHOSPHORYLASE 1); glucose-1-phosphate adenylyltransferase

Coordinates

chrA06:+:21179852..21182630

Molecular Weight (calculated)

55973.2 Da

IEP (calculated)

6.940

GRAVY (calculated)

-0.139

Length

512 amino acids

Sequence
(BLAST)

001: MASIAATGVL KVPPPAAASC EAVPTMTLSF SSSVSLRATV SHRRGSVLSR NRVRNPMIVS PKAVSDSQNS QTCLDPDASR SVLGIILGGG AGTRLYPLTK
101: KRAKPAVPLG ANYRLIDIPV SNCLNSNINK IYVLTQFNSA SLNRHLSRAY ATNMGGYKNE GFVEVLAAQQ SPENPNWFQG TADAVRQYLW LFEEHNVLEY
201: LILAGDHLYR MDYEKFIQAH RETDADITVA ALPMDEERAT AFGLMKIDEE GRIVEFAEKP KGEQLKGMKV DTTILGLDDK RAKEMPYIAS MGIYVVSKDV
301: MLELLRNKFP GANDFGSEVI PGATSLGLRV QAYLYDGYWE DIGTIEAFYN ANLGITKKPV PDFSFYDRSA PIYTQPRYLP PSKMLDADVT DSVIGEGCVI
401: KNCKIHHSVV GLRSCISEGA IIEDSLLMGA DYYETASEKS LLTAKGSVPI GIGKNSHIKR AIIDKNARIG DNVKIINSDN VQEAARETEG YFIKSGIVTV
501: IKDALIPTGT LI

Best Arabidopsis Sequence Match ( AT5G48300.1 )
(BLAST)

001: MASVSAIGVL KVPPASTSNS TGKATEAVPT RTLSFSSSVT SSDDKISLKS TVSRLCKSVV RRNPIIVSPK AVSDSQNSQT CLDPDASSSV LGIILGGGAG
101: TRLYPLTKKR AKPAVPLGAN YRLIDIPVSN CLNSNISKIY VLTQFNSASL NRHLSRAYAS NMGGYKNEGF VEVLAAQQSP ENPNWFQGTA DAVRQYLWLF
201: EEHNVLEYLI LAGDHLYRMD YEKFIQAHRE TDADITVAAL PMDEQRATAF GLMKIDEEGR IIEFAEKPKG EHLKAMKVDT TILGLDDQRA KEMPFIASMG
301: IYVVSRDVML DLLRNQFPGA NDFGSEVIPG ATSLGLRVQA YLYDGYWEDI GTIEAFYNAN LGITKKPVPD FSFYDRSAPI YTQPRYLPPS KMLDADVTDS
401: VIGEGCVIKN CKIHHSVVGL RSCISEGAII EDSLLMGADY YETATEKSLL SAKGSVPIGI GKNSHIKRAI IDKNARIGDN VKIINSDNVQ EAARETDGYF
501: IKSGIVTVIK DALIPTGTVI

Arabidopsis Description

APS1Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55228]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.