Factsheet for Zm00001d025723_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d023256_P001	Maize	cytosol	22.82	96.04
KRH14152	Soybean	plastid	41.88	55.45
Solyc12g011120.1.1	Tomato	plastid	50.12	48.19
KXG24924	Sorghum	plastid	58.12	47.78
Zm00001d032385_P001	Maize	plastid	57.88	47.58
Zm00001d050032_P003	Maize	plastid	58.82	47.53
TraesCS7B01G183300.1	Wheat	plastid	56.94	47.08
TraesCS7D01G284900.1	Wheat	plastid	56.94	47.08
HORVU7Hr1G067620.2	Barley	plastid	56.71	46.89
Os08t0345800-02	Rice	plastid	56.71	46.89
TraesCS7A01G287400.2	Wheat	golgi, plastid	56.24	46.68
VIT_12s0057g01480.t01	Wine grape	plastid	54.82	45.78
KRH73984	Soybean	nucleus, plastid	55.06	45.44
CDY68655	Canola	plastid	54.35	45.21
Bra037495.1-P	Field mustard	plastid	54.35	45.12
Zm00001d005546_P002	Maize	plastid	54.12	45.1
CDX86314	Canola	plastid	54.35	45.03
AT5G48300.1	Thale cress	plastid	54.82	44.81
Bra015135.1-P	Field mustard	plastid	54.35	44.42
CDY27884	Canola	plastid	54.35	44.42
CDY00843	Canola	plastid	54.35	44.42
Solyc07g056140.2.1	Tomato	plastid	54.35	44.34
PGSC0003DMT400079823	Potato	cytosol, extracellular, plastid	54.12	44.15
GSMUA_Achr1P09400_001	Banana	plastid	53.65	43.43
PGSC0003DMT400097320	Potato	plastid	51.76	42.39
Zm00001d010157_P001	Maize	plastid	35.29	37.04
Zm00001d033910_P002	Maize	plastid	36.47	29.58
Zm00001d019266_P002	Maize	plastid	34.82	28.63
KRH14151	Soybean	cytosol	11.06	25.68
Zm00001d039131_P007	Maize	plastid	33.41	25.45
Zm00001d044129_P001	Maize	cytosol, nucleus, plastid	31.53	20.36

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:3.90.550.10	MapMan:50.2.7	UniProt:A0A1D6J8X7	InterPro:ADP_Glu_pyroP_CS
ProteinID:AQK44373.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005575	GO:GO:0005975
GO:GO:0005978	GO:GO:0006091	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0008878
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016779
GO:GO:0022857	GO:GO:0055085	InterPro:IPR029044	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483
PFAM:PF06027	ScanProsite:PS00810	PANTHER:PTHR43523	PANTHER:PTHR43523:SF9	InterPro:SLC35_F1/F2/F6	SUPFAM:SSF53448
UniParc:UPI0008454E76	EnsemblPlantsGene:Zm00001d025723	EnsemblPlants:Zm00001d025723_P001	EnsemblPlants:Zm00001d025723_T001	SEG:seg	:

Description

Glucose-1-phosphate adenylyltransferase small subunit chloroplastic

Coordinates

chr10:-:127571715..127575954

Molecular Weight (calculated)

47412.6 Da

IEP (calculated)

5.539

GRAVY (calculated)

-0.245

Length

425 amino acids

Sequence
(BLAST)

001: MKQPWPPPRA VPPRLDYSDD EASIGSAGSA GTRLYPLTKK RAKPAVPLGA NYRLIDIPVN SCLNSNISKI YVLAQFNSAF LNRHLSRAYG SNIGGYKNEG
101: FVEVLAAQPS PDNPNWFQST ADAAHRETYA DITVAALPMA EKRATAFGLM KIDEEGRIIE FAEKTKGEQF TEMMVDTTIL SLDDVRAKEM PYIASMGIYV
201: FSKDVMLQLL REQFSEANDF GSEVIPGATS IVKRVQAYLY DGYWEEMWAV LIRIFAHQEK VDWMYFVPFA GTTVGLVIYS YRGSRQNPKE TARDHQHFFI
301: PYDRRVLMIG GLRSSFAMDA PCSTVLIFRQ DLATMEWEEA GRMPPNMYCC FTGLCEAASQ GGAIPTDAAG GNNKVKVLGG DGKVWFAGKR VRGKLAMWEE
401: YEMGSSGKWD WVDGLPGYGD VESLF

Best Arabidopsis Sequence Match ( AT1G27680.1 )
(BLAST)

001: MESCFPAMKL NQCTFGLNNE IVSERVSAFW GTQVVKPNHL RTTKLRSAPQ KKIQTNLIRS VLTPFVDQES HEPLLRTQNA DPKNVASIIL GGGAGTRLFP
101: LTSKRAKPAV PIGGCYRLID IPMSNCINSG IRKIFILTQF NSFSLNRHLS RTYNFGNGVN FGDGFVEVLA ATQTSGDAGK KWFQGTADAV RQFIWVFEDA
201: KTKNVEHVLI LSGDHLYRMD YMNFVQKHIE SNADITVSCL PMDESRASDF GLLKIDQSGK IIQFSEKPKG DDLKAMQVDT SILGLPPKEA AESPYIASMG
301: VYVFRKEVLL KLLRSSYPTS NDFGSEIIPL AVGEHNVQAF LFNDYWEDIG TIGSFFDANL ALTEQPPKFQ FYDQKTPFFT SPRFLPPTKV DKCRILDSIV
401: SHGCFLRECS VQHSIVGIRS RLESGVELQD TMMMGADFYQ TEAEIASLLA EGKVPVGVGQ NTKIKNCIID KNAKIGKNVV IANADGVEEG DRPEEGFHIR
501: SGITVVLKNA TIRDGLHI

Arabidopsis Description

APL2Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55230]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.