Factsheet for Zm00001d032385_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 20089766
plastid: 22065420
plastid: 23198870

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG24924	Sorghum	plastid	97.1	97.1
Zm00001d050032_P003	Maize	plastid	94.2	92.59
TraesCS7D01G284900.1	Wheat	plastid	90.72	91.25
TraesCS7B01G183300.1	Wheat	plastid	90.72	91.25
HORVU7Hr1G067620.2	Barley	plastid	90.33	90.86
TraesCS7A01G287400.2	Wheat	golgi, plastid	89.94	90.82
KRH14151	Soybean	cytosol	31.91	90.16
Os08t0345800-02	Rice	plastid	88.39	88.91
Solyc12g011120.1.1	Tomato	plastid	73.11	85.52
KRH73984	Soybean	nucleus, plastid	82.98	83.3
Zm00001d023256_P001	Maize	cytosol	16.25	83.17
Zm00001d005546_P002	Maize	plastid	82.01	83.14
VIT_12s0057g01480.t01	Wine grape	plastid	81.62	82.91
CDY00843	Canola	plastid	82.98	82.5
Bra015135.1-P	Field mustard	plastid	82.79	82.31
CDY27884	Canola	plastid	82.79	82.31
CDY68655	Canola	plastid	81.24	82.19
CDX86314	Canola	plastid	81.24	81.87
Bra037495.1-P	Field mustard	plastid	80.85	81.64
Solyc07g056140.2.1	Tomato	plastid	81.62	81.0
AT5G48300.1	Thale cress	plastid	81.43	80.96
PGSC0003DMT400079823	Potato	cytosol, extracellular, plastid	80.85	80.23
GSMUA_Achr1P09400_001	Banana	plastid	80.27	79.05
KRH14152	Soybean	plastid	48.94	78.82
PGSC0003DMT400097320	Potato	plastid	77.37	77.07
Zm00001d025723_P001	Maize	cytosol	47.58	57.88
Zm00001d010157_P001	Maize	plastid	41.39	52.84
Zm00001d033910_P002	Maize	plastid	49.71	49.05
Zm00001d019266_P002	Maize	plastid	46.81	46.81
Zm00001d039131_P007	Maize	plastid	43.71	40.5
Zm00001d044129_P001	Maize	cytosol, nucleus, plastid	41.97	32.98

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	EntrezGene:542295
ProteinID:AAK69628.1	InterPro:ADP-Glc_PPase	InterPro:ADP_Glu_pyroP_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005975	GO:GO:0005978	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0008878
GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	GO:GO:0016779
GO:GO:0019252	InterPro:IPR029044	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	ProteinID:ONM04985.1	PFAM:PF00483
ScanProsite:PS00808	ScanProsite:PS00809	ScanProsite:PS00810	PANTHER:PTHR43523	PANTHER:PTHR43523:SF7	UniProt:Q947B9
SUPFAM:SSF51161	SUPFAM:SSF53448	TIGRFAMs:TIGR02091	InterPro:Trimer_LpxA-like_sf	UniParc:UPI000009F23D	EnsemblPlantsGene:Zm00001d032385
EnsemblPlants:Zm00001d032385_P001	EnsemblPlants:Zm00001d032385_T001	:	:	:	:

Description

ADP glucose pyrophosphorylase small subunit leaf1 ADP glucose pyrophosphorylase small subunit leaf1

Coordinates

chr1:+:224920493..224925108

Molecular Weight (calculated)

56485.6 Da

IEP (calculated)

6.951

GRAVY (calculated)

-0.202

Length

517 amino acids

Sequence
(BLAST)

001: MAMAAIASPS SRTLIPPRHH GAAPSPSTSG DSSLRLLCAH PRHGRRGRAM SVSTPAARSR PFVFSPRAVS DSKSSQTCLD PDASTSVLGI ILGGGAGTRL
101: YPLTKKRAKP AVPLGANYRL IDIPVSNCLN SNISKIYVLT QFNSASLNRH LSRAYGNNIG GYKNDGFVEV LAAQQSPDNP NWFQGTADAV RQYLWLFEEH
201: NVMEFLILAG DHLYRMDYEK FIQAHRETDA DITVAALPMD EKRATAFGLM KIDEEGRIIE FAEKPKGDQL KAMMVDTTIL GLDDERAKEM PYIASMGIYV
301: FSKDVMLQLL REQFPGANDF GSEVIPGATS IGKRVQAYLY DGYWEDIGTI EAFYNANLGI TKKPIPDFSF YDRSAPIYTQ PRHLPPSKVL DADVTDSVIG
401: EGCVIKNCKI HHSVVGLRSC ISEGAIIEDT LLMGADYYET EADKKLLAEN GGIPIGIGKN SHIRKAIIDK NARIGDNVKI LNADNVQEAA RETDGYFIKG
501: GIVTVIKDAL LPSGTVI

Best Arabidopsis Sequence Match ( AT5G48300.1 )
(BLAST)

001: MASVSAIGVL KVPPASTSNS TGKATEAVPT RTLSFSSSVT SSDDKISLKS TVSRLCKSVV RRNPIIVSPK AVSDSQNSQT CLDPDASSSV LGIILGGGAG
101: TRLYPLTKKR AKPAVPLGAN YRLIDIPVSN CLNSNISKIY VLTQFNSASL NRHLSRAYAS NMGGYKNEGF VEVLAAQQSP ENPNWFQGTA DAVRQYLWLF
201: EEHNVLEYLI LAGDHLYRMD YEKFIQAHRE TDADITVAAL PMDEQRATAF GLMKIDEEGR IIEFAEKPKG EHLKAMKVDT TILGLDDQRA KEMPFIASMG
301: IYVVSRDVML DLLRNQFPGA NDFGSEVIPG ATSLGLRVQA YLYDGYWEDI GTIEAFYNAN LGITKKPVPD FSFYDRSAPI YTQPRYLPPS KMLDADVTDS
401: VIGEGCVIKN CKIHHSVVGL RSCISEGAII EDSLLMGADY YETATEKSLL SAKGSVPIGI GKNSHIKRAI IDKNARIGDN VKIINSDNVQ EAARETDGYF
501: IKSGIVTVIK DALIPTGTVI

Arabidopsis Description

APS1Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55228]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.