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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, plastid

Predictor Summary:
  • plastid 8
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plastid
Any Predictor:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
golgi: 23128297
msms, gfp PMID: 23128297 doi
M Suliman, AL Chateigner-Boutin, M Francin-Allami, A Partier, B Bouchet, J Salse, C Pont, J Marion, H Rogniaux, D Tessier, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G284900.1 Wheat plastid 99.41 99.03
TraesCS7B01G183300.1 Wheat plastid 99.02 98.64
HORVU7Hr1G067620.2 Barley plastid 98.83 98.44
KRH14151 Soybean cytosol 33.01 92.35
Zm00001d032385_P001 Maize plastid 90.82 89.94
KXG24924 Sorghum plastid 90.82 89.94
Os08t0345800-02 Rice plastid 89.84 89.49
Zm00001d050032_P003 Maize plastid 89.26 86.88
Solyc12g011120.1.1 Tomato plastid 74.22 85.97
CDY68655 Canola plastid 83.2 83.37
KRH73984 Soybean nucleus, plastid 83.59 83.11
CDX86314 Canola plastid 83.01 82.85
Bra037495.1-P Field mustard plastid 82.62 82.62
VIT_12s0057g01480.t01 Wine grape plastid 82.03 82.51
Solyc07g056140.2.1 Tomato plastid 83.59 82.15
CDY00843 Canola plastid 83.4 82.12
CDY27884 Canola plastid 83.2 81.92
Bra015135.1-P Field mustard plastid 83.2 81.92
PGSC0003DMT400079823 Potato cytosol, extracellular, plastid 82.81 81.38
AT5G48300.1 Thale cress plastid 82.42 81.15
Zm00001d023256_P001 Maize cytosol 15.82 80.2
GSMUA_Achr1P09400_001 Banana plastid 81.25 79.24
KRH14152 Soybean plastid 49.02 78.19
PGSC0003DMT400097320 Potato plastid 78.71 77.65
Zm00001d025723_P001 Maize cytosol 46.68 56.24
TraesCS5A01G472000.1 Wheat plastid 49.02 49.7
TraesCS1A01G419600.2 Wheat plastid 41.02 38.82
Protein Annotations
KEGG:00500+2.7.7.27KEGG:00520+2.7.7.27Gene3D:2.160.10.10MapMan:3.2.2.3Gene3D:3.90.550.10InterPro:ADP-Glc_PPase
InterPro:ADP_Glu_pyroP_CSGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005975GO:GO:0005978GO:GO:0005982GO:GO:0006091GO:GO:0008150
GO:GO:0008152GO:GO:0008878GO:GO:0009058GO:GO:0009501GO:GO:0009536GO:GO:0009987
GO:GO:0016740GO:GO:0016779InterPro:IPR029044InterPro:NTP_transferase_domInterPro:Nucleotide-diphossugar_transPFAM:PF00483
ScanProsite:PS00808ScanProsite:PS00809ScanProsite:PS00810PANTHER:PTHR43523PANTHER:PTHR43523:SF7SUPFAM:SSF51161
SUPFAM:SSF53448TIGRFAMs:TIGR02091EnsemblPlantsGene:TraesCS7A01G287400EnsemblPlants:TraesCS7A01G287400.2InterPro:Trimer_LpxA-like_sfTIGR:cd02508
TIGR:cd04651SEG:seg::::
Description
No Description!
Coordinates
chr7A:+:342610540..342617114
Molecular Weight (calculated)
56114.4 Da
IEP (calculated)
6.848
GRAVY (calculated)
-0.150
Length
512 amino acids
Sequence
(BLAST)
001: MAAAASPSKI LIPPHRASAA TAAASTSCDS LRLLCAPRGR RQRPRVLVAR PAPRRPFFFS SRAVSDSKSS QTCLDPDAST SVLGIILGGG AGTRLYPLTK
101: KRAKPAVPLG ANYRLIDIPV SNCLNSNISK IYVLTQFNSA SLNRHLSRAY GSNIGGYKNE GFVEVLAAQQ SPDNPDWFQG TADAVRQYLW LFEEHNVMEY
201: LILAGDHLYR MDYEKFIQAH RETDADITVA ALPMDEERAT AFGLMKIDEE GRIIEFSEKP KGEQLKAMMV DTTILGLDDA RAKEMPYIAS MGIYVISKHV
301: MLQLLREQFP GANDFGSEVI PGATSTGMRV QAYLYDGYWE DIGTIEAFYN ANLGITKKPI PDFSFYDRSA PIYTQPRHLP PSKVLDADVT DSVIGEGCVI
401: KNCKIHHSVV GLRSCISEGA IIEDTLLMGA DYYETEADKK LLAEKGGIPI GIGKNSHIKR AIIDKNARIG DNVMIINVDN VQEAARETDG YFIKSGIVTV
501: IKDALLPSGT VI
Best Arabidopsis Sequence Match ( AT5G48300.1 )
(BLAST)
001: MASVSAIGVL KVPPASTSNS TGKATEAVPT RTLSFSSSVT SSDDKISLKS TVSRLCKSVV RRNPIIVSPK AVSDSQNSQT CLDPDASSSV LGIILGGGAG
101: TRLYPLTKKR AKPAVPLGAN YRLIDIPVSN CLNSNISKIY VLTQFNSASL NRHLSRAYAS NMGGYKNEGF VEVLAAQQSP ENPNWFQGTA DAVRQYLWLF
201: EEHNVLEYLI LAGDHLYRMD YEKFIQAHRE TDADITVAAL PMDEQRATAF GLMKIDEEGR IIEFAEKPKG EHLKAMKVDT TILGLDDQRA KEMPFIASMG
301: IYVVSRDVML DLLRNQFPGA NDFGSEVIPG ATSLGLRVQA YLYDGYWEDI GTIEAFYNAN LGITKKPVPD FSFYDRSAPI YTQPRYLPPS KMLDADVTDS
401: VIGEGCVIKN CKIHHSVVGL RSCISEGAII EDSLLMGADY YETATEKSLL SAKGSVPIGI GKNSHIKRAI IDKNARIGDN VKIINSDNVQ EAARETDGYF
501: IKSGIVTVIK DALIPTGTVI
Arabidopsis Description
APS1Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55228]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.