CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g011120.1.1	Tomato	plastid	87.98	36.43
KRH73984	Soybean	nucleus, plastid	100.0	35.53
VIT_12s0057g01480.t01	Wine grape	plastid	96.17	34.58
CDY68655	Canola	plastid	93.44	33.46
Bra015135.1-P	Field mustard	plastid	94.54	33.27
CDY00843	Canola	plastid	94.54	33.27
CDY27884	Canola	plastid	94.54	33.27
Bra037495.1-P	Field mustard	plastid	92.9	33.2
CDX86314	Canola	plastid	92.9	33.14
AT5G48300.1	Thale cress	plastid	93.99	33.08
Solyc07g056140.2.1	Tomato	plastid	93.99	33.01
TraesCS7A01G287400.2	Wheat	golgi, plastid	92.35	33.01
GSMUA_Achr1P09400_001	Banana	plastid	94.54	32.95
TraesCS7D01G284900.1	Wheat	plastid	92.35	32.88
TraesCS7B01G183300.1	Wheat	plastid	92.35	32.88
HORVU7Hr1G067620.2	Barley	plastid	92.35	32.88
PGSC0003DMT400079823	Potato	cytosol, extracellular, plastid	93.44	32.82
Os08t0345800-02	Rice	plastid	91.26	32.49
KXG24924	Sorghum	plastid	90.71	32.11
Zm00001d032385_P001	Maize	plastid	90.16	31.91
Os09t0298200-01	Rice	plastid	86.89	31.8
Zm00001d005546_P002	Maize	plastid	87.98	31.57
EER98661	Sorghum	plastid	87.43	31.37
TraesCS5D01G182600.1	Wheat	plastid	85.25	31.14
TraesCS5B01G175800.1	Wheat	plastid	85.25	31.14
PGSC0003DMT400097320	Potato	plastid	87.98	31.02
Zm00001d050032_P003	Maize	plastid	87.98	30.61
KRH68365	Soybean	plastid	54.1	18.71
KRG96634	Soybean	plastid	54.1	18.71
KRH24456	Soybean	plastid	52.46	18.18
KRH29435	Soybean	cytosol	52.46	18.11
KRH51516	Soybean	plastid	51.37	18.11
KRH51050	Soybean	nucleus, plastid	51.37	18.08
KRH02097	Soybean	nucleus, plastid	51.37	17.97
KRH15167	Soybean	mitochondrion, plastid	50.82	17.78
KRH61137	Soybean	plastid	51.37	17.74
KRH05853	Soybean	plastid	50.27	17.56
KRH60824	Soybean	plastid	49.73	17.53
KRH51829	Soybean	plastid	50.82	17.51
Zm00001d025723_P001	Maize	cytosol	25.68	11.06
Zm00001d023256_P001	Maize	cytosol	1.64	2.97
KRH14152	Soybean	plastid	0.0	0.0

Protein Annotations

EMBL:ACUP02008492	EnsemblPlants:KRH14151	EnsemblPlantsGene:GLYMA_14G0093002	Gene3D:2.160.10.10	Gene3D:3.90.550.10	InterPro:IPR029044
InterPro:Nucleotide-diphossugar_trans	InterPro:Trimer_LpxA-like_sf	PANTHER:PTHR43523	PANTHER:PTHR43523:SF9	ProteinID:KRH14151	ProteinID:KRH14151.1
SUPFAM:SSF51161	UniParc:UPI0006ED8113	UniProt:A0A0R0G7Z9	MapMan:50.2.7	:	:

Description

hypothetical protein

Coordinates

chr14:-:728111..730293

Molecular Weight (calculated)

20123.0 Da

IEP (calculated)

5.289

GRAVY (calculated)

-0.117

Length

183 amino acids

Sequence
(BLAST)

001: VQAYLYDGYW EDIGTIEAFY NANLGITKKP VPDFSFYDRS SPIYTQPRYL PPSKMLDADV TDSVIGEGCV IKNCKIHHSV VGLRSCISEG AIIEDTLLMG
101: ADYYETEADK RFLAAKGSVP IGIGRNSHIK RAIIDKNARI GENVKIINSD NVQEAARETD GYFIKSGIVT VIKDALIPSG TVI

Best Arabidopsis Sequence Match ( AT1G27680.1 )
(BLAST)

001: MESCFPAMKL NQCTFGLNNE IVSERVSAFW GTQVVKPNHL RTTKLRSAPQ KKIQTNLIRS VLTPFVDQES HEPLLRTQNA DPKNVASIIL GGGAGTRLFP
101: LTSKRAKPAV PIGGCYRLID IPMSNCINSG IRKIFILTQF NSFSLNRHLS RTYNFGNGVN FGDGFVEVLA ATQTSGDAGK KWFQGTADAV RQFIWVFEDA
201: KTKNVEHVLI LSGDHLYRMD YMNFVQKHIE SNADITVSCL PMDESRASDF GLLKIDQSGK IIQFSEKPKG DDLKAMQVDT SILGLPPKEA AESPYIASMG
301: VYVFRKEVLL KLLRSSYPTS NDFGSEIIPL AVGEHNVQAF LFNDYWEDIG TIGSFFDANL ALTEQPPKFQ FYDQKTPFFT SPRFLPPTKV DKCRILDSIV
401: SHGCFLRECS VQHSIVGIRS RLESGVELQD TMMMGADFYQ TEAEIASLLA EGKVPVGVGQ NTKIKNCIID KNAKIGKNVV IANADGVEEG DRPEEGFHIR
501: SGITVVLKNA TIRDGLHI

Arabidopsis Description

APL2Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55230]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.