CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15167	Soybean	mitochondrion, plastid	93.89	94.07
KRH51829	Soybean	plastid	73.66	72.69
KRH61137	Soybean	plastid	72.9	72.08
CDY41275	Canola	cytosol	44.08	71.74
VIT_18s0001g12840.t01	Wine grape	plastid	69.66	69.66
CDX84911	Canola	plastid	66.22	68.04
CDY27626	Canola	plastid	66.6	67.5
Bra032842.1-P	Field mustard	plastid	66.6	67.5
AT1G27680.1	Thale cress	plastid	65.46	66.22
PGSC0003DMT400041215	Potato	plastid	65.65	66.03
Solyc07g019440.2.1	Tomato	plastid	65.08	65.83
GSMUA_Achr4P10620_001	Banana	mitochondrion, vacuole	57.82	65.58
GSMUA_Achr4P02930_001	Banana	mitochondrion	56.49	64.77
GSMUA_Achr9P06920_001	Banana	cytosol	63.74	64.35
KRH24456	Soybean	plastid	64.31	63.83
GSMUA_Achr6P27190_001	Banana	cytosol, nucleus, plastid	63.74	63.74
KRH29435	Soybean	cytosol	63.74	63.02
KRH51516	Soybean	plastid	62.21	62.81
KRH60824	Soybean	plastid	62.02	62.62
KRG96634	Soybean	plastid	59.73	59.17
Os05t0580000-01	Rice	plastid	58.21	58.77
HORVU1Hr1G091600.9	Barley	plastid	58.21	58.1
TraesCS1B01G449700.2	Wheat	plastid	58.4	57.95
KRH68365	Soybean	plastid	58.02	57.47
KRH51050	Soybean	nucleus, plastid	56.87	57.31
KRH02097	Soybean	nucleus, plastid	56.87	56.98
Zm00001d039131_P007	Maize	plastid	59.92	56.27
Os01t0633100-01	Rice	plastid	54.01	54.63
OQU87201	Sorghum	plastid	51.91	52.61
TraesCS1A01G419600.2	Wheat	plastid	54.2	52.5
TraesCS1D01G427400.2	Wheat	plastid	54.2	52.5
KRH14151	Soybean	cytosol	17.56	50.27
KRH73984	Soybean	nucleus, plastid	45.99	46.8
KRH14152	Soybean	plastid	28.24	46.11
OQU78492	Sorghum	plastid	59.35	45.8
CDY11773	Canola	endoplasmic reticulum, plastid, vacuole	10.69	41.18
Zm00001d044129_P001	Maize	cytosol, nucleus, plastid	51.53	41.03

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	EntrezGene:100818512	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10
EMBL:ACUP02010781	InterPro:ADP-Glc_PPase	InterPro:ADP_Glu_pyroP_CS	EnsemblPlantsGene:GLYMA_17G252500	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005975	GO:GO:0005978	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0008878	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016740
GO:GO:0016779	GO:GO:0019252	InterPro:IPR029044	UniProt:K7MNW9	EnsemblPlants:KRH05853	ProteinID:KRH05853
ProteinID:KRH05853.1	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483	ScanProsite:PS00809	PANTHER:PTHR43523
PANTHER:PTHR43523:SF5	MetaCyc:PWY-622	SUPFAM:SSF51161	SUPFAM:SSF53448	TIGRFAMs:TIGR02091	InterPro:Trimer_LpxA-like_sf
UniParc:UPI000233E933	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:40677740..40682000

Molecular Weight (calculated)

58057.4 Da

IEP (calculated)

7.423

GRAVY (calculated)

-0.206

Length

524 amino acids

Sequence
(BLAST)

001: MDATFATLNA SANLVTKGIG SRNRTSSGFW GENTRGSFNM RFCSVQSRKS LKATTFKPGF AQAVYSPDVN KEPLVFHGPI FQNPKANPEN VAAIILGGGA
101: GTRLFPLTST RAKQAVPIAG CYRLIDIPMS NCINSGIRKV YVLTQFNSFS LNGHLSRTYN FGNGVNFGGG FVEVLAATKT PGESGNKWFQ GTADAVRRFI
201: WVFEDAKNKD IENILIISGD HLCRMDYMKL LEKHIGTNAD ITVSCVPMDE SRASDYELMK IDRKGQITQF VEKPEGSDLQ AMHVDTTLLG LTAEEAQTYP
301: YIAPMGVSVF RTETLLKLLR WSCPSCNDFG SEIIPSALRD HKVQAYMFRD YWKDIGTIKS FFEANLELTK QSPNFEFYDQ ETPFFTSPRF LPPTKAIKCK
401: IMDAIISHGC FLSESRVQHS IVGVRSRLES GSELQDTMMM GADYYQTDSE IATLLEEGKV PIGVGENTRI RNCIIDKNAR IGRNVIIANT DGVQEADRPA
501: EGFYIRSGIV VVVKNATIED GTVI

Best Arabidopsis Sequence Match ( AT1G27680.1 )
(BLAST)

001: MESCFPAMKL NQCTFGLNNE IVSERVSAFW GTQVVKPNHL RTTKLRSAPQ KKIQTNLIRS VLTPFVDQES HEPLLRTQNA DPKNVASIIL GGGAGTRLFP
101: LTSKRAKPAV PIGGCYRLID IPMSNCINSG IRKIFILTQF NSFSLNRHLS RTYNFGNGVN FGDGFVEVLA ATQTSGDAGK KWFQGTADAV RQFIWVFEDA
201: KTKNVEHVLI LSGDHLYRMD YMNFVQKHIE SNADITVSCL PMDESRASDF GLLKIDQSGK IIQFSEKPKG DDLKAMQVDT SILGLPPKEA AESPYIASMG
301: VYVFRKEVLL KLLRSSYPTS NDFGSEIIPL AVGEHNVQAF LFNDYWEDIG TIGSFFDANL ALTEQPPKFQ FYDQKTPFFT SPRFLPPTKV DKCRILDSIV
401: SHGCFLRECS VQHSIVGIRS RLESGVELQD TMMMGADFYQ TEAEIASLLA EGKVPVGVGQ NTKIKNCIID KNAKIGKNVV IANADGVEEG DRPEEGFHIR
501: SGITVVLKNA TIRDGLHI

Arabidopsis Description

APL2Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55230]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.