Factsheet for GSMUA_Achr4P02930_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 5
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P10620_001	Banana	mitochondrion, vacuole	87.53	86.58
GSMUA_Achr6P27190_001	Banana	cytosol, nucleus, plastid	80.74	70.42
GSMUA_Achr9P06920_001	Banana	cytosol	79.87	70.33
CDY41275	Canola	cytosol	47.92	68.01
KRH61137	Soybean	plastid	73.09	63.02
VIT_18s0001g12840.t01	Wine grape	plastid	72.21	62.98
VIT_03s0038g04570.t01	Wine grape	cytosol	71.99	62.43
CDX84911	Canola	plastid	69.15	61.96
KRH51829	Soybean	plastid	71.99	61.96
KRH51516	Soybean	plastid	70.02	61.66
Bra032842.1-P	Field mustard	plastid	69.58	61.51
CDY27626	Canola	plastid	69.58	61.51
KRH60824	Soybean	plastid	69.8	61.46
PGSC0003DMT400041215	Potato	plastid	69.37	60.84
Solyc07g019440.2.1	Tomato	plastid	68.93	60.81
KRH24456	Soybean	plastid	70.02	60.61
AT1G27680.1	Thale cress	plastid	68.49	60.42
KRH29435	Soybean	cytosol	69.58	60.0
Os05t0580000-01	Rice	plastid	68.05	59.92
Solyc01g109790.2.1	Tomato	extracellular	68.27	59.54
AT4G39210.1	Thale cress	plastid	67.83	59.5
Bra033604.1-P	Field mustard	cytosol, plastid	67.83	59.27
AT2G21590.4	Thale cress	plastid	67.83	59.27
CDY15884	Canola	cytosol, plastid	67.18	59.04
Bra030291.1-P	Field mustard	cytosol, plastid	67.18	59.04
HORVU1Hr1G091600.9	Barley	plastid	67.61	58.86
CDX99581	Canola	cytosol, plastid	67.4	58.67
PGSC0003DMT400001935	Potato	plastid	64.11	58.6
TraesCS1B01G449700.2	Wheat	plastid	67.61	58.52
KRH15167	Soybean	mitochondrion, plastid	64.99	56.79
KRH05853	Soybean	plastid	64.77	56.49
Zm00001d039131_P007	Maize	plastid	68.27	55.91
Os01t0633100-01	Rice	plastid	63.02	55.6
OQU87201	Sorghum	plastid	61.93	54.74
TraesCS1A01G419600.2	Wheat	plastid	63.24	53.42
TraesCS1D01G427400.2	Wheat	plastid	63.02	53.23
GSMUA_Achr1P11820_001	Banana	plastid	62.14	52.3
CDY56761	Canola	endoplasmic reticulum	67.61	51.93
CDX72711	Canola	cytosol	66.96	48.42
OQU78492	Sorghum	plastid	68.05	45.8
GSMUA_Achr1P09400_001	Banana	plastid	49.23	42.86
Zm00001d044129_P001	Maize	cytosol, nucleus, plastid	61.71	42.86
CDY11773	Canola	endoplasmic reticulum, plastid, vacuole	12.25	41.18
GSMUA_Achr3P21710_001	Banana	plastid	29.54	34.88

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	InterPro:ADP-Glc_PPase
InterPro:ADP_Glu_pyroP_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0005978
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0008878	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	GO:GO:0016779	GO:GO:0019252	EnsemblPlantsGene:GSMUA_Achr4G02930_001
EnsemblPlants:GSMUA_Achr4P02930_001	EnsemblPlants:GSMUA_Achr4T02930_001	InterPro:IPR029044	UniProt:M0SKL0	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans
PFAM:PF00483	ScanProsite:PS00808	ScanProsite:PS00809	ScanProsite:PS00810	PANTHER:PTHR43523	PANTHER:PTHR43523:SF4
SUPFAM:SSF51161	SUPFAM:SSF53448	TIGRFAMs:TIGR02091	InterPro:Trimer_LpxA-like_sf	UniParc:UPI000296084F	SEG:seg

Description

Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr4G02930_001]

Coordinates

chr4:+:2386476..2391388

Molecular Weight (calculated)

51010.4 Da

IEP (calculated)

6.709

GRAVY (calculated)

-0.099

Length

457 amino acids

Sequence
(BLAST)

001: MLRLQVIQAP MFGKHKPDPK SVASIILGGG PGAQLFPLTS TRATPAVPVG GCYKLIDIPM SNCINSGINK IFIMTQYNSA SLNRHIYRTF NFGNGINFGD
101: GFVEVLAATQ SPGEAGMNWF QGTADAVRQF IWVFEDNRNK NIDYIMILSG DQLYRMDYMD FVQACRHIDT GADITISCVP VSSSRASDYG IVKIDKAGHI
201: IQFSEKPKGA DLEAMKDENT FFRLSHQDTI RYPYIASMGV YVFNRNTLLE LLRWTYPKAN DFGLDILPSA VKAYKAQAYI FEDYWDDIGT IKSFYDANLA
301: LTEQPPKFQF YDPRTPIFTS PRFLPPTKIE KCRILDSIIS HGCFLHECSI EHSIVGVRSR IDYGAELKDA LMLGADLYET EAELASILAE GKVPIGVGQN
401: TKIRNCIIDM NARIGKNVVI ANKDGVQEAD RPSEGFYIRF GITIIMKNAT IKDGTVI

Best Arabidopsis Sequence Match ( AT1G27680.1 )
(BLAST)

001: MESCFPAMKL NQCTFGLNNE IVSERVSAFW GTQVVKPNHL RTTKLRSAPQ KKIQTNLIRS VLTPFVDQES HEPLLRTQNA DPKNVASIIL GGGAGTRLFP
101: LTSKRAKPAV PIGGCYRLID IPMSNCINSG IRKIFILTQF NSFSLNRHLS RTYNFGNGVN FGDGFVEVLA ATQTSGDAGK KWFQGTADAV RQFIWVFEDA
201: KTKNVEHVLI LSGDHLYRMD YMNFVQKHIE SNADITVSCL PMDESRASDF GLLKIDQSGK IIQFSEKPKG DDLKAMQVDT SILGLPPKEA AESPYIASMG
301: VYVFRKEVLL KLLRSSYPTS NDFGSEIIPL AVGEHNVQAF LFNDYWEDIG TIGSFFDANL ALTEQPPKFQ FYDQKTPFFT SPRFLPPTKV DKCRILDSIV
401: SHGCFLRECS VQHSIVGIRS RLESGVELQD TMMMGADFYQ TEAEIASLLA EGKVPVGVGQ NTKIKNCIID KNAKIGKNVV IANADGVEEG DRPEEGFHIR
501: SGITVVLKNA TIRDGLHI

Arabidopsis Description

APL2Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55230]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.