CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 6
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033604.1-P	Field mustard	cytosol, plastid	86.72	98.66
AT4G39210.1	Thale cress	plastid	79.83	91.17
CDX72711	Canola	cytosol	91.09	85.76
CDX99581	Canola	cytosol, plastid	73.45	83.24
CDY15884	Canola	cytosol, plastid	72.44	82.88
KRH60824	Soybean	plastid	63.7	73.03
KRH51516	Soybean	plastid	63.7	73.03
KRH24456	Soybean	plastid	64.03	72.16
VIT_03s0038g04570.t01	Wine grape	cytosol	63.53	71.73
KRH29435	Soybean	cytosol	63.7	71.51
Solyc01g109790.2.1	Tomato	extracellular	62.35	70.8
PGSC0003DMT400001935	Potato	plastid	59.5	70.8
CDY41275	Canola	cytosol	37.82	69.88
GSMUA_Achr4P02930_001	Banana	mitochondrion	51.93	67.61
GSMUA_Achr4P10620_001	Banana	mitochondrion, vacuole	51.76	66.67
CDX84911	Canola	plastid	55.8	65.1
CDY27626	Canola	plastid	56.13	64.6
GSMUA_Achr9P06920_001	Banana	cytosol	56.3	64.55
GSMUA_Achr6P27190_001	Banana	cytosol, nucleus, plastid	56.13	63.74
HORVU1Hr1G091600.9	Barley	plastid	52.94	60.0
Os05t0580000-01	Rice	plastid	52.27	59.92
TraesCS1B01G449700.2	Wheat	plastid	53.11	59.85
CDY02573	Canola	plastid	50.25	57.95
CDX92546	Canola	plastid	50.08	57.75
CDY68209	Canola	plastid	49.92	57.56
Os01t0633100-01	Rice	plastid	49.24	56.56
OQU87201	Sorghum	plastid	48.91	56.29
Zm00001d039131_P007	Maize	plastid	52.6	56.09
CDY47206	Canola	plastid	50.08	55.08
TraesCS1A01G419600.2	Wheat	plastid	49.92	54.9
TraesCS1D01G427400.2	Wheat	plastid	49.92	54.9
CDX86314	Canola	plastid	40.84	47.37
CDY68655	Canola	plastid	40.67	47.36
CDY00843	Canola	plastid	40.84	46.73
OQU78492	Sorghum	plastid	52.94	46.39
CDY27884	Canola	plastid	40.34	46.15
Zm00001d044129_P001	Maize	cytosol, nucleus, plastid	48.91	44.22
CDY10130	Canola	plastid	29.08	35.89
CDY47264	Canola	plastid	28.91	35.68
CDY11773	Canola	endoplasmic reticulum, plastid, vacuole	8.07	35.29

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	GO:A0A078J344
UniProt:A0A078J344	InterPro:ADP-Glc_PPase	InterPro:ADP_Glu_pyroP_CS	EnsemblPlants:CDY56761	ProteinID:CDY56761	ProteinID:CDY56761.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0005978	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0008878	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009987	GO:GO:0016740	GO:GO:0016779	GO:GO:0019252	EnsemblPlantsGene:GSBRNA2T00020056001	InterPro:IPR029044
InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483	ScanProsite:PS00808	ScanProsite:PS00809	ScanProsite:PS00810
PANTHER:PTHR43523	PANTHER:PTHR43523:SF4	MetaCyc:PWY-622	SUPFAM:SSF51161	SUPFAM:SSF53448	SignalP:SignalP-noTM
TIGRFAMs:TIGR02091	InterPro:Trimer_LpxA-like_sf	UniPathway:UPA00164	UniParc:UPI0004EDCE4A	SEG:seg	:

Description

BnaA06g40730DGlucose-1-phosphate adenylyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A078J344]

Coordinates

chrLK033516:-:34276..38109

Molecular Weight (calculated)

66434.6 Da

IEP (calculated)

8.096

GRAVY (calculated)

-0.225

Length

595 amino acids

Sequence
(BLAST)

001: MQRTWCILIV LIITNFKLDI LDTIEKGRYF YFGSSSLITS PRSLLWVHEG HITLIQNQTI RIRSLQSGDL KNMDSCCYLG LGTNTVLPKD GYKNIENSFW
101: GEKIKGSFSK PFASDSSSKE LRYRKSPRPG VAYAVATSKN AKEALRLQPS MLGERRKADP KNVAAIILGG GNGAKLFPLT KRAATPAVPV GGCYRMIDIP
201: MSNCINSCIN KIFVLTQFNS ASLNRHLART YFGNGINFGD GFVEVLAATQ TPGEAGKKWF QGTADAVRKF LWVFEDAKNR NIENIIILSG DHLYRMNYMD
301: FVQYHVDSNA DITLSCAPVG ESRASDYGLV NIDRTGRVVH FCEKPTGIDL KSMQSDTTML GLSQQEAVKS PYIASMGVYC FKTEALLKLL TRRYPSSNDF
401: GSEIIPAAIR DHNVQGYVYR DYWEDIGTIK SFYDANLALV EEHPKFEFYD QDTPFYTSPR FLPPTKTEKC RIVDSIISHG CFLGECSIQR SIIGERSRLD
501: YGVELQDTLM LGADSYQTES EIASLLAEGN VPIGIGRDTK IRKCIIDKNA KIGKNVMILN SDDVQEADRP EEGFYIRSGI TVVVEKATIK DGTVI

Best Arabidopsis Sequence Match ( AT4G39210.1 )
(BLAST)

001: MDSCCNFSLG TKTVLAKDSF KNVENKFLGE KIKGSVLKPF SSDLSSKKFR NRKLRPGVAY AIATSKNAKE ALKNQPSMFE RRRADPKNVA AIILGGGDGA
101: KLFPLTKRAA TPAVPVGGCY RMIDIPMSNC INSCINKIFV LTQFNSASLN RHLARTYFGN GINFGDGFVE VLAATQTPGE AGKKWFQGTA DAVRKFLWVF
201: EDAKNRNIEN IIILSGDHLY RMNYMDFVQH HVDSKADITL SCAPVDESRA SEYGLVNIDR SGRVVHFSEK PTGIDLKSMQ TDTTMHGLSH QEAAKSPYIA
301: SMGVYCFKTE ALLKLLTWRY PSSNDFGSEI IPAAIKDHNV QGYIYRDYWE DIGTIKSFYE ANIALVEEHP KFEFYDQNTP FYTSPRFLPP TKTEKCRIVN
401: SVISHGCFLG ECSIQRSIIG ERSRLDYGVE LQDTLMLGAD SYQTESEIAS LLAEGNVPIG IGRDTKIRKC IIDKNAKIGK NVVIMNKDDV KEADRPEEGF
501: YIRSGITVVV EKATIKDGTV I

Arabidopsis Description

APL3Glucose-1-phosphate adenylyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178US50]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.