CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015135.1-P	Field mustard	plastid	100.0	100.0
CDY00843	Canola	plastid	99.04	99.04
KRH14151	Soybean	cytosol	33.27	94.54
VIT_12s0057g01480.t01	Wine grape	plastid	88.08	89.98
KRH73984	Soybean	nucleus, plastid	88.65	89.51
Solyc12g011120.1.1	Tomato	plastid	74.42	87.56
Solyc07g056140.2.1	Tomato	plastid	87.69	87.52
KRH14152	Soybean	plastid	53.85	87.23
PGSC0003DMT400079823	Potato	cytosol, extracellular, plastid	87.31	87.14
CDX86314	Canola	plastid	85.77	86.94
CDY68655	Canola	plastid	85.38	86.89
TraesCS7B01G183300.1	Wheat	plastid	82.69	83.66
TraesCS7D01G284900.1	Wheat	plastid	82.5	83.46
GSMUA_Achr1P09400_001	Banana	plastid	84.23	83.43
Os08t0345800-02	Rice	plastid	82.31	83.27
HORVU7Hr1G067620.2	Barley	plastid	82.31	83.27
TraesCS7A01G287400.2	Wheat	golgi, plastid	81.92	83.2
KXG24924	Sorghum	plastid	82.31	82.79
Zm00001d032385_P001	Maize	plastid	82.31	82.79
PGSC0003DMT400097320	Potato	plastid	82.12	82.27
Os09t0298200-01	Rice	plastid	77.88	81.0
TraesCS5B01G175800.1	Wheat	plastid	77.88	80.84
TraesCS5D01G182600.1	Wheat	plastid	77.5	80.44
Zm00001d050032_P003	Maize	plastid	80.96	80.04
Zm00001d005546_P002	Maize	plastid	78.08	79.61
EER98661	Sorghum	plastid	77.88	79.41
Zm00001d023256_P001	Maize	cytosol	14.81	76.24
Zm00001d025723_P001	Maize	cytosol	44.42	54.35
CDX92546	Canola	plastid	51.15	51.55
CDY68209	Canola	plastid	50.96	51.36
CDY02573	Canola	plastid	50.77	51.16
CDY41275	Canola	cytosol	31.54	50.93
CDX84911	Canola	plastid	48.46	49.41
CDY47206	Canola	plastid	50.58	48.61
CDY27626	Canola	plastid	48.27	48.55
CDY15884	Canola	cytosol, plastid	47.31	47.31
CDX99581	Canola	cytosol, plastid	47.69	47.24
CDY10130	Canola	plastid	40.77	43.98
CDY47264	Canola	plastid	40.58	43.78
CDY56761	Canola	endoplasmic reticulum	46.15	40.34
CDX72711	Canola	cytosol	45.77	37.66
CDY11773	Canola	endoplasmic reticulum, plastid, vacuole	7.12	27.21

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	GO:A0A078GRR8
UniProt:A0A078GRR8	InterPro:ADP-Glc_PPase	InterPro:ADP_Glu_pyroP_CS	unigene:Bna.2321	EnsemblPlants:CDY27884	ProteinID:CDY27884
ProteinID:CDY27884.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0005978
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0008878	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	GO:GO:0016779	GO:GO:0019252	EnsemblPlantsGene:GSBRNA2T00038740001
InterPro:IPR029044	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483	ScanProsite:PS00808	ScanProsite:PS00809
ScanProsite:PS00810	PANTHER:PTHR43523	PANTHER:PTHR43523:SF9	MetaCyc:PWY-622	UniProt:Q9M462	SUPFAM:SSF51161
SUPFAM:SSF53448	TIGRFAMs:TIGR02091	InterPro:Trimer_LpxA-like_sf	UniPathway:UPA00164	UniParc:UPI000012B5D5	SEG:seg

Description

BnaA07g04740DGlucose-1-phosphate adenylyltransferase small subunit, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M462]

Coordinates

chrLK032211:+:239411..241932

Molecular Weight (calculated)

57048.1 Da

IEP (calculated)

6.139

GRAVY (calculated)

-0.215

Length

520 amino acids

Sequence
(BLAST)

001: MATMAAIGSL KVPSSSSNHT RRLSSSSQRK TLSFSSSSLT GEKLNPTQEI IISNLPRGNE RRTPSIVSPK AVSDSQNSQT CLDPDASRSV LGIILGGGAG
101: TRLYPLTKKR AKPAVPLGAN YRLIDIPVSN CLNSNISKIY VLTQFNSASL NRHLSRAYAS NMGGYKNEGF VEVLAAQQSP ENPNWFQGTA DAVRQYLWLF
201: EEHNVLEFLV LAGDHLYRMD YEKFIQAHRE TDADITVAAL PMDEKRATAF GLMKIDDEGR IIEFAEKPKG EQLKAMKVDT TILGLDDERA KEMPFIASMG
301: IYVVSKNVML DLLRDQFPGA NDFGSEVIPG ATDLGLRVQA YLYDGYWEDI GTIEAFYNAN LGITKKPVPD FSFYDRSAPI YTQPRYLPPS KMLDADVTDS
401: VIGEGCVIKN CKIHHSVIGL RSCISEGAII EDTLLMGADY YETDADRTLL AAKGSIPIGI GRDSHIKRAI IDKNARIGDN VKIINTDNVQ EAARETDGYF
501: IKSGIVTVIK DALIPSGTVI

Best Arabidopsis Sequence Match ( AT5G48300.1 )
(BLAST)

001: MASVSAIGVL KVPPASTSNS TGKATEAVPT RTLSFSSSVT SSDDKISLKS TVSRLCKSVV RRNPIIVSPK AVSDSQNSQT CLDPDASSSV LGIILGGGAG
101: TRLYPLTKKR AKPAVPLGAN YRLIDIPVSN CLNSNISKIY VLTQFNSASL NRHLSRAYAS NMGGYKNEGF VEVLAAQQSP ENPNWFQGTA DAVRQYLWLF
201: EEHNVLEYLI LAGDHLYRMD YEKFIQAHRE TDADITVAAL PMDEQRATAF GLMKIDEEGR IIEFAEKPKG EHLKAMKVDT TILGLDDQRA KEMPFIASMG
301: IYVVSRDVML DLLRNQFPGA NDFGSEVIPG ATSLGLRVQA YLYDGYWEDI GTIEAFYNAN LGITKKPVPD FSFYDRSAPI YTQPRYLPPS KMLDADVTDS
401: VIGEGCVIKN CKIHHSVVGL RSCISEGAII EDSLLMGADY YETATEKSLL SAKGSVPIGI GKNSHIKRAI IDKNARIGDN VKIINSDNVQ EAARETDGYF
501: IKSGIVTVIK DALIPTGTVI

Arabidopsis Description

APS1Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55228]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.