Factsheet for GSMUA_Achr1P09400_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH14151	Soybean	cytosol	32.95	94.54
Solyc12g011120.1.1	Tomato	plastid	72.19	85.75
VIT_12s0057g01480.t01	Wine grape	plastid	82.67	85.27
KRH73984	Soybean	nucleus, plastid	82.67	84.27
Bra015135.1-P	Field mustard	plastid	83.43	84.23
CDY00843	Canola	plastid	83.43	84.23
CDY27884	Canola	plastid	83.43	84.23
CDX86314	Canola	plastid	81.71	83.63
Bra037495.1-P	Field mustard	plastid	81.52	83.59
CDY68655	Canola	plastid	81.33	83.56
Solyc07g056140.2.1	Tomato	plastid	82.86	83.49
PGSC0003DMT400079823	Potato	cytosol, extracellular, plastid	82.29	82.92
AT5G48300.1	Thale cress	plastid	81.52	82.31
TraesCS7B01G183300.1	Wheat	plastid	79.81	81.52
TraesCS7D01G284900.1	Wheat	plastid	79.62	81.32
TraesCS7A01G287400.2	Wheat	golgi, plastid	79.24	81.25
HORVU7Hr1G067620.2	Barley	plastid	79.43	81.13
Os09t0298200-01	Rice	plastid	76.95	80.8
Os08t0345800-02	Rice	plastid	78.86	80.54
Zm00001d032385_P001	Maize	plastid	79.05	80.27
KXG24924	Sorghum	plastid	78.67	79.88
TraesCS5B01G175800.1	Wheat	plastid	75.24	78.84
TraesCS5D01G182600.1	Wheat	plastid	75.05	78.64
PGSC0003DMT400097320	Potato	plastid	77.71	78.61
KRH14152	Soybean	plastid	48.0	78.5
Zm00001d005546_P002	Maize	plastid	76.0	78.24
Zm00001d050032_P003	Maize	plastid	78.29	78.14
EER98661	Sorghum	plastid	75.43	77.65
Zm00001d023256_P001	Maize	cytosol	14.48	75.25
Zm00001d025723_P001	Maize	cytosol	43.43	53.65
GSMUA_Achr4P10620_001	Banana	mitochondrion, vacuole	44.76	50.87
GSMUA_Achr4P02930_001	Banana	mitochondrion	42.86	49.23
GSMUA_Achr1P11820_001	Banana	plastid	48.76	47.15
GSMUA_Achr9P06920_001	Banana	cytosol	45.71	46.24
GSMUA_Achr6P27190_001	Banana	cytosol, nucleus, plastid	45.33	45.42
GSMUA_Achr3P21710_001	Banana	plastid	31.81	43.15

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	InterPro:ADP-Glc_PPase
InterPro:ADP_Glu_pyroP_CS	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005576	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005975	GO:GO:0005978	GO:GO:0006091	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0008878	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009628
GO:GO:0009791	GO:GO:0009987	GO:GO:0016740	GO:GO:0016779	GO:GO:0019252	GO:GO:0030931
GO:GO:0048046	GO:GO:0048573	EnsemblPlantsGene:GSMUA_Achr1G09400_001	EnsemblPlants:GSMUA_Achr1P09400_001	EnsemblPlants:GSMUA_Achr1T09400_001	InterPro:IPR029044
UniProt:M0RYE9	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483	ScanProsite:PS00808	ScanProsite:PS00809
ScanProsite:PS00810	PANTHER:PTHR43523	PANTHER:PTHR43523:SF9	SUPFAM:SSF51161	SUPFAM:SSF53448	TIGRFAMs:TIGR02091
InterPro:Trimer_LpxA-like_sf	UniParc:UPI0002957A78	:	:	:	:

Description

Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr1G09400_001]

Coordinates

chr1:+:7227493..7232992

Molecular Weight (calculated)

57500.1 Da

IEP (calculated)

7.862

GRAVY (calculated)

-0.168

Length

525 amino acids

Sequence
(BLAST)

001: MAAMGIAKLP PLNNSVHPAH RKSPTPFLAS SDPRLSSSFH VSGGNDNILL LRKAAIASGR RTASGARTPV LVSPKAVSDS RSSQTCLDPD ASRSVLGIIL
101: GGGAGTRLYP LTKKRAKPAV PLGANYRLID IPVSNCLNSN ILKIYVLTQF NSASLNRHLS RAYASNMGGY QNEGFVEVLA AQQSPENPNW FQGTADAVRQ
201: YLWLFEEHNV MEYLILAGDH LYRMDYEKFI QAHRETNADI TVAALPMDEK RATAFGLMKI DEEGRIIEFA EKPKGDQLKA MKVDTTILGL DNERAKEMPF
301: IASMGIYVIS KDIMLQLLRD KFAGANDFGS EVIPGATNVG MRVQAYLYDG YWEDIGTIEA FYNANLGITK KPVPDFSFYD RTSPIYTQPR YLPPSKMLDA
401: DVTDSVIGEG CVIKNCKIHH SVIGLRSCIS EGAVLEDTLL MGADYYETDA DRRLLAAKGS VPMGIGRNSH VKRAIIDKNA RIGENVKIIN CDNVQEAARE
501: TDGYFIKSGI VTVIKDALIP SGTVI

Best Arabidopsis Sequence Match ( AT5G48300.1 )
(BLAST)

001: MASVSAIGVL KVPPASTSNS TGKATEAVPT RTLSFSSSVT SSDDKISLKS TVSRLCKSVV RRNPIIVSPK AVSDSQNSQT CLDPDASSSV LGIILGGGAG
101: TRLYPLTKKR AKPAVPLGAN YRLIDIPVSN CLNSNISKIY VLTQFNSASL NRHLSRAYAS NMGGYKNEGF VEVLAAQQSP ENPNWFQGTA DAVRQYLWLF
201: EEHNVLEYLI LAGDHLYRMD YEKFIQAHRE TDADITVAAL PMDEQRATAF GLMKIDEEGR IIEFAEKPKG EHLKAMKVDT TILGLDDQRA KEMPFIASMG
301: IYVVSRDVML DLLRNQFPGA NDFGSEVIPG ATSLGLRVQA YLYDGYWEDI GTIEAFYNAN LGITKKPVPD FSFYDRSAPI YTQPRYLPPS KMLDADVTDS
401: VIGEGCVIKN CKIHHSVVGL RSCISEGAII EDSLLMGADY YETATEKSLL SAKGSVPIGI GKNSHIKRAI IDKNARIGDN VKIINSDNVQ EAARETDGYF
501: IKSGIVTVIK DALIPTGTVI

Arabidopsis Description

APS1Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55228]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.