Factsheet for GSMUA_Achr6P27190_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P06920_001	Banana	cytosol	84.16	84.97
GSMUA_Achr4P02930_001	Banana	mitochondrion	70.42	80.74
GSMUA_Achr4P10620_001	Banana	mitochondrion, vacuole	69.85	79.22
VIT_18s0001g12840.t01	Wine grape	plastid	71.95	71.95
CDY41275	Canola	cytosol	43.51	70.81
KRH61137	Soybean	plastid	70.42	69.62
KRH51829	Soybean	plastid	70.04	69.11
VIT_03s0038g04570.t01	Wine grape	cytosol	69.08	68.69
PGSC0003DMT400041215	Potato	plastid	67.94	68.33
CDX84911	Canola	plastid	66.22	68.04
KRH60824	Soybean	plastid	67.37	68.02
KRH51516	Soybean	plastid	67.37	68.02
Solyc07g019440.2.1	Tomato	plastid	67.18	67.95
CDY27626	Canola	plastid	66.41	67.31
Bra032842.1-P	Field mustard	plastid	66.41	67.31
KRH24456	Soybean	plastid	67.75	67.23
AT1G27680.1	Thale cress	plastid	66.22	66.99
KRH29435	Soybean	cytosol	67.18	66.42
Os05t0580000-01	Rice	plastid	65.65	66.28
Solyc01g109790.2.1	Tomato	extracellular	66.03	66.03
PGSC0003DMT400001935	Potato	plastid	62.21	65.2
HORVU1Hr1G091600.9	Barley	plastid	65.08	64.95
TraesCS1B01G449700.2	Wheat	plastid	65.27	64.77
KRH05853	Soybean	plastid	63.74	63.74
KRH15167	Soybean	mitochondrion, plastid	63.55	63.67
Bra033604.1-P	Field mustard	cytosol, plastid	63.55	63.67
AT4G39210.1	Thale cress	plastid	62.98	63.34
AT2G21590.4	Thale cress	plastid	62.21	62.33
CDY15884	Canola	cytosol, plastid	61.45	61.92
Bra030291.1-P	Field mustard	cytosol, plastid	61.45	61.92
Zm00001d039131_P007	Maize	plastid	65.65	61.65
CDX99581	Canola	cytosol, plastid	61.45	61.33
Os01t0633100-01	Rice	plastid	60.11	60.81
OQU87201	Sorghum	plastid	59.16	59.96
TraesCS1A01G419600.2	Wheat	plastid	61.64	59.7
TraesCS1D01G427400.2	Wheat	plastid	61.45	59.52
CDY56761	Canola	endoplasmic reticulum	63.74	56.13
GSMUA_Achr1P11820_001	Banana	plastid	57.25	55.25
CDX72711	Canola	cytosol	62.79	52.06
OQU78492	Sorghum	plastid	65.46	50.52
Zm00001d044129_P001	Maize	cytosol, nucleus, plastid	57.44	45.74
GSMUA_Achr1P09400_001	Banana	plastid	45.42	45.33
CDY11773	Canola	endoplasmic reticulum, plastid, vacuole	10.5	40.44
GSMUA_Achr3P21710_001	Banana	plastid	25.57	34.63

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	InterPro:ADP-Glc_PPase
InterPro:ADP_Glu_pyroP_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0005978
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0008878	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	GO:GO:0016779	GO:GO:0019252	EnsemblPlantsGene:GSMUA_Achr6G27190_001
EnsemblPlants:GSMUA_Achr6P27190_001	EnsemblPlants:GSMUA_Achr6T27190_001	InterPro:IPR029044	UniProt:M0TAL4	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans
PFAM:PF00483	ScanProsite:PS00808	ScanProsite:PS00809	ScanProsite:PS00810	PANTHER:PTHR43523	PANTHER:PTHR43523:SF5
SUPFAM:SSF51161	SUPFAM:SSF53448	TIGRFAMs:TIGR02091	InterPro:Trimer_LpxA-like_sf	UniParc:UPI000295A0D5	SEG:seg

Description

Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr6G27190_001]

Coordinates

chr6:+:27775835..27779046

Molecular Weight (calculated)

57811.7 Da

IEP (calculated)

7.894

GRAVY (calculated)

-0.102

Length

524 amino acids

Sequence
(BLAST)

001: MEVCSVGMKA NVCFGQVKRR SVGSGESGIW GEGIGGGGGG LKIKVWETKV VKGVKRRNSL GAAVAVLTSD VSEETMVLHA PMFGYRTAEP KSVASIILGG
101: GAGTQLFPLT STRATPAVPI GGCYRLIDIP MSNCINSGIN KIFIMTQFNS ASLNRHISRT YIFGNGINFG DGFVEVLAAT QTPGEAGMNW FQGTADAVRQ
201: FTWVFEDNRN KNIEHIVILS GDQLYRMDYM DLKHIDTGAD ITVSCVPVGH SRASDYGLVK IDKTGRIFQF SEKPNGAELE AMKDGGSFLR LSRQDAMKYP
301: YIASMGVYVF KRDVLSKLLR WKYPKANDFG SEILPSVVKE HNVQAYIFND YWEDIGTIRS FFDANLALTE QPPKFQFYDP MTPFFTSPRF LPPTKIEKCR
401: IVDAIISHGC FLRECSVERS IVGVRSRLDF DAELKDTMMM GADIYETEAE IASLLADDKV PIGVGQNTRI RNCIIDMNAR IGKNVVIANK DGIQEADRPC
501: EGFYIRSGIT IIMKNSTIKD GTVI

Best Arabidopsis Sequence Match ( AT1G27680.1 )
(BLAST)

001: MESCFPAMKL NQCTFGLNNE IVSERVSAFW GTQVVKPNHL RTTKLRSAPQ KKIQTNLIRS VLTPFVDQES HEPLLRTQNA DPKNVASIIL GGGAGTRLFP
101: LTSKRAKPAV PIGGCYRLID IPMSNCINSG IRKIFILTQF NSFSLNRHLS RTYNFGNGVN FGDGFVEVLA ATQTSGDAGK KWFQGTADAV RQFIWVFEDA
201: KTKNVEHVLI LSGDHLYRMD YMNFVQKHIE SNADITVSCL PMDESRASDF GLLKIDQSGK IIQFSEKPKG DDLKAMQVDT SILGLPPKEA AESPYIASMG
301: VYVFRKEVLL KLLRSSYPTS NDFGSEIIPL AVGEHNVQAF LFNDYWEDIG TIGSFFDANL ALTEQPPKFQ FYDQKTPFFT SPRFLPPTKV DKCRILDSIV
401: SHGCFLRECS VQHSIVGIRS RLESGVELQD TMMMGADFYQ TEAEIASLLA EGKVPVGVGQ NTKIKNCIID KNAKIGKNVV IANADGVEEG DRPEEGFHIR
501: SGITVVLKNA TIRDGLHI

Arabidopsis Description

APL2Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55230]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.